Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.03■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Atg4a-psA0A0G2JFS9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atg4a-psA0A0G2JFS9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.03■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC20.03■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Atg4a-psA0A0G2JFS9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.02■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.02■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Atg4a-psA0A0G2JFS9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC20.02■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Atg4a-psA0A0G2JFS9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC20.01■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.01■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC20.01■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC20.01■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atg4a-psA0A0G2JFS9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Atg4a-psA0A0G2JFS9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC20■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Gm6623-201ENSMUST00000173570 544 ntBASIC20■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Gm29518-201ENSMUST00000190858 372 ntBASIC20■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC20■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atg4a-psA0A0G2JFS9 AA414768-201ENSMUST00000121924 1257 ntBASIC19.99■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.99■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.99■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Atg4a-psA0A0G2JFS9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms