Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv4-53A0A0G2JFC6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv4-53A0A0G2JFC6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC11.65□□□□□ -0.54
Igkv4-53A0A0G2JFC6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC11.65□□□□□ -0.54
Igkv4-53A0A0G2JFC6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv4-53A0A0G2JFC6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv4-53A0A0G2JFC6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Igkv4-53A0A0G2JFC6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv4-53A0A0G2JFC6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv4-53A0A0G2JFC6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Igkv4-53A0A0G2JFC6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC11.65□□□□□ -0.54
Igkv4-53A0A0G2JFC6 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Igkv4-53A0A0G2JFC6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 AC135963.1-201ENSMUST00000211640 717 ntBASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Gm5417-201ENSMUST00000079706 384 ntBASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Igkv4-53A0A0G2JFC6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Gm13216-201ENSMUST00000117145 591 ntBASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Gm27463-201ENSMUST00000183569 57 ntBASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Gm45412-201ENSMUST00000210217 2275 ntBASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Igkv4-53A0A0G2JFC6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC11.62□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.62□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Gm43353-201ENSMUST00000199224 1295 ntBASIC11.62□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv4-53A0A0G2JFC6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms