Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.37□□□□□ -0.43
Trav9-4A0A0B4J1K2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav9-4A0A0B4J1K2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-4A0A0B4J1K2 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trav9-4A0A0B4J1K2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav9-4A0A0B4J1K2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-4A0A0B4J1K2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-4A0A0B4J1K2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-4A0A0B4J1K2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.36□□□□□ -0.43
Trav9-4A0A0B4J1K2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-4A0A0B4J1K2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-4A0A0B4J1K2 Gm11355-201ENSMUST00000121120 306 ntBASIC12.36□□□□□ -0.43
Trav9-4A0A0B4J1K2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-4A0A0B4J1K2 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.36□□□□□ -0.43
Trav9-4A0A0B4J1K2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav9-4A0A0B4J1K2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-4A0A0B4J1K2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-4A0A0B4J1K2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-4A0A0B4J1K2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-4A0A0B4J1K2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav9-4A0A0B4J1K2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav9-4A0A0B4J1K2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Gm37722-201ENSMUST00000193757 208 ntBASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Gm44450-201ENSMUST00000199528 114 ntBASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Trav9-4A0A0B4J1K2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 Gm18421-201ENSMUST00000204122 625 ntBASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav9-4A0A0B4J1K2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms