Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv5-45A0A0B4J1J1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-45A0A0B4J1J1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.77■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-45A0A0B4J1J1 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.77■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.77■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.77■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.77■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.77■□□□□ 0.27
Igkv5-45A0A0B4J1J1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-45A0A0B4J1J1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.76■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.76■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-45A0A0B4J1J1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.75■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Mir6404-201ENSMUST00000183699 94 ntBASIC16.75■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.75■□□□□ 0.27
Igkv5-45A0A0B4J1J1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.75■□□□□ 0.27
Igkv5-45A0A0B4J1J1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.75■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Gm7461-201ENSMUST00000058918 827 ntBASIC16.75■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.75■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv5-45A0A0B4J1J1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv5-45A0A0B4J1J1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv5-45A0A0B4J1J1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms