Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv2A0A0B4J1G8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv2A0A0B4J1G8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv2A0A0B4J1G8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trbv2A0A0B4J1G8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv2A0A0B4J1G8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv2A0A0B4J1G8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv2A0A0B4J1G8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 Gm20049-201ENSMUST00000219950 730 ntBASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv2A0A0B4J1G8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trbv2A0A0B4J1G8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Gm38027-201ENSMUST00000192315 235 ntBASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.61□□□□□ -0.07
Trbv2A0A0B4J1G8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv2A0A0B4J1G8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trbv2A0A0B4J1G8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms