Protein–RNA interactions for Protein: A0A087WSL9

Gm28539, Predicted gene 28539, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28539A0A087WSL9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm28539A0A087WSL9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Gm28539A0A087WSL9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm28539A0A087WSL9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm28539A0A087WSL9 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm28539A0A087WSL9 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm28539A0A087WSL9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm28539A0A087WSL9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Gm28539A0A087WSL9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm28539A0A087WSL9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm28539A0A087WSL9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm28539A0A087WSL9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Gm28539A0A087WSL9 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Gm28539A0A087WSL9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.71
Gm28539A0A087WSL9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Gm28539A0A087WSL9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Gm28539A0A087WSL9 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Gm28539A0A087WSL9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Gm28539A0A087WSL9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Gm28539A0A087WSL9 Gm11841-201ENSMUST00000117060 1963 ntBASIC10.65□□□□□ -0.71
Gm28539A0A087WSL9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Gm28539A0A087WSL9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Gm28539A0A087WSL9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Gm28539A0A087WSL9 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Gm37820-201ENSMUST00000194021 2147 ntBASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Gm28539A0A087WSL9 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gm28539A0A087WSL9 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
Gm28539A0A087WSL9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gm28539A0A087WSL9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Gm28539A0A087WSL9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gm28539A0A087WSL9 Gm10620-201ENSMUST00000098379 1332 ntBASIC10.63□□□□□ -0.71
Gm28539A0A087WSL9 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gm28539A0A087WSL9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Gm28539A0A087WSL9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC10.63□□□□□ -0.71
Gm28539A0A087WSL9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gm28539A0A087WSL9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC10.63□□□□□ -0.71
Gm28539A0A087WSL9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gm28539A0A087WSL9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Gm28539A0A087WSL9 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Gm28539A0A087WSL9 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Gm28539A0A087WSL9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Gm28539A0A087WSL9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms