Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Gm12933-201ENSMUST00000120203 872 ntBASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Gm37179-201ENSMUST00000194862 823 ntBASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Gm10602-201ENSMUST00000098239 609 ntBASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Gm27275-201ENSMUST00000184318 272 ntBASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Gm37292-201ENSMUST00000192062 758 ntBASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav13-4-dv7A0A075B6C2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms