Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6d-5A0A075B6B9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6d-5A0A075B6B9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6d-5A0A075B6B9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Gm9731-201ENSMUST00000209480 747 ntBASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6d-5A0A075B6B9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms