Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-7A0A075B6B0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-7A0A075B6B0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-7A0A075B6B0 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-7A0A075B6B0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-7A0A075B6B0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Trav6d-7A0A075B6B0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-7A0A075B6B0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-7A0A075B6B0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav6d-7A0A075B6B0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Trav6d-7A0A075B6B0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms