Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Gm2559-201ENSMUST00000201323 363 ntBASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Gm45560-201ENSMUST00000211492 1472 ntBASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav13-2A0A075B649 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav13-2A0A075B649 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav13-2A0A075B649 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-2A0A075B649 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-2A0A075B649 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-2A0A075B649 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-2A0A075B649 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC11.08□□□□□ -0.64
Trav13-2A0A075B649 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-2A0A075B649 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-2A0A075B649 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-2A0A075B649 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-2A0A075B649 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13-2A0A075B649 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms