Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav8-1A0A075B641 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav8-1A0A075B641 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav8-1A0A075B641 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav8-1A0A075B641 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav8-1A0A075B641 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav8-1A0A075B641 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav8-1A0A075B641 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav8-1A0A075B641 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav8-1A0A075B641 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav8-1A0A075B641 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav8-1A0A075B641 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav8-1A0A075B641 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav8-1A0A075B641 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav8-1A0A075B641 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav8-1A0A075B641 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav8-1A0A075B641 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav8-1A0A075B641 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav8-1A0A075B641 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav8-1A0A075B641 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav8-1A0A075B641 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav8-1A0A075B641 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav8-1A0A075B641 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav8-1A0A075B641 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav8-1A0A075B641 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav8-1A0A075B641 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav8-1A0A075B641 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav8-1A0A075B641 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav8-1A0A075B641 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav8-1A0A075B641 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav8-1A0A075B641 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC11.87□□□□□ -0.51
Trav8-1A0A075B641 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav8-1A0A075B641 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav8-1A0A075B641 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav8-1A0A075B641 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav8-1A0A075B641 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav8-1A0A075B641 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav8-1A0A075B641 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Gm29791-202ENSMUST00000207888 369 ntBASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav8-1A0A075B641 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Gm43272-201ENSMUST00000200599 1584 ntBASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Gm13146-201ENSMUST00000118508 780 ntBASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Prob1-201ENSMUST00000097619 3021 ntBASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav8-1A0A075B641 Reep4-203ENSMUST00000226563 1444 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms