Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-7-dv9A0A075B639 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-7-dv9A0A075B639 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-7-dv9A0A075B639 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-7-dv9A0A075B639 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-7-dv9A0A075B639 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-7-dv9A0A075B639 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-7-dv9A0A075B639 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav6-7-dv9A0A075B639 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-7-dv9A0A075B639 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-7-dv9A0A075B639 Mir1668-201ENSMUST00000184114 107 ntBASIC14.59□□□□□ -0.07
Trav6-7-dv9A0A075B639 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.59□□□□□ -0.07
Trav6-7-dv9A0A075B639 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.59□□□□□ -0.07
Trav6-7-dv9A0A075B639 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav6-7-dv9A0A075B639 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav6-7-dv9A0A075B639 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav6-7-dv9A0A075B639 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-7-dv9A0A075B639 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-7-dv9A0A075B639 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
Trav6-7-dv9A0A075B639 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-7-dv9A0A075B639 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav6-7-dv9A0A075B639 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-7-dv9A0A075B639 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-7-dv9A0A075B639 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-7-dv9A0A075B639 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-7-dv9A0A075B639 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-7-dv9A0A075B639 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-7-dv9A0A075B639 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-7-dv9A0A075B639 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6-7-dv9A0A075B639 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6-7-dv9A0A075B639 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6-7-dv9A0A075B639 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6-7-dv9A0A075B639 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6-7-dv9A0A075B639 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-7-dv9A0A075B639 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav6-7-dv9A0A075B639 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-7-dv9A0A075B639 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-7-dv9A0A075B639 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-7-dv9A0A075B639 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-7-dv9A0A075B639 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gm13559-201ENSMUST00000120476 863 ntBASIC14.58□□□□□ -0.08
Trav6-7-dv9A0A075B639 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.58□□□□□ -0.08
Trav6-7-dv9A0A075B639 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gm44450-201ENSMUST00000199528 114 ntBASIC14.58□□□□□ -0.08
Trav6-7-dv9A0A075B639 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-7-dv9A0A075B639 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-7-dv9A0A075B639 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-7-dv9A0A075B639 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-7-dv9A0A075B639 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-7-dv9A0A075B639 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-7-dv9A0A075B639 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Trav6-7-dv9A0A075B639 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-7-dv9A0A075B639 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-7-dv9A0A075B639 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-7-dv9A0A075B639 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 Mir5130-201ENSMUST00000175160 84 ntBASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gm29707-201ENSMUST00000196325 491 ntBASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.56□□□□□ -0.08
Trav6-7-dv9A0A075B639 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms