Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav7n-4A0A075B620 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7n-4A0A075B620 Gm45417-201ENSMUST00000209533 758 ntBASIC12.52□□□□□ -0.41
Trav7n-4A0A075B620 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC12.52□□□□□ -0.41
Trav7n-4A0A075B620 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav7n-4A0A075B620 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7n-4A0A075B620 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav7n-4A0A075B620 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7n-4A0A075B620 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7n-4A0A075B620 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav7n-4A0A075B620 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7n-4A0A075B620 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7n-4A0A075B620 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Gm27454-201ENSMUST00000185090 204 ntBASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Flg-201ENSMUST00000050758 1488 ntBASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7n-4A0A075B620 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7n-4A0A075B620 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav7n-4A0A075B620 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7n-4A0A075B620 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7n-4A0A075B620 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7n-4A0A075B620 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7n-4A0A075B620 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7n-4A0A075B620 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav7n-4A0A075B620 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7n-4A0A075B620 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7n-4A0A075B620 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7n-4A0A075B620 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7n-4A0A075B620 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trav7n-4A0A075B620 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7n-4A0A075B620 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7n-4A0A075B620 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav7n-4A0A075B620 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav7n-4A0A075B620 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav7n-4A0A075B620 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7n-4A0A075B620 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7n-4A0A075B620 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7n-4A0A075B620 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7n-4A0A075B620 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav7n-4A0A075B620 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav7n-4A0A075B620 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav7n-4A0A075B620 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav7n-4A0A075B620 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7n-4A0A075B620 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav7n-4A0A075B620 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav7n-4A0A075B620 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7n-4A0A075B620 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7n-4A0A075B620 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav7n-4A0A075B620 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms