Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav1A0A075B5Z4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav1A0A075B5Z4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav1A0A075B5Z4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav1A0A075B5Z4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav1A0A075B5Z4 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav1A0A075B5Z4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav1A0A075B5Z4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav1A0A075B5Z4 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.3■□□□□ 0.04
Trav1A0A075B5Z4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav1A0A075B5Z4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav1A0A075B5Z4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.3■□□□□ 0.04
Trav1A0A075B5Z4 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav1A0A075B5Z4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav1A0A075B5Z4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav1A0A075B5Z4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav1A0A075B5Z4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav1A0A075B5Z4 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav1A0A075B5Z4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.3■□□□□ 0.04
Trav1A0A075B5Z4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav1A0A075B5Z4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav1A0A075B5Z4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav1A0A075B5Z4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav1A0A075B5Z4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav1A0A075B5Z4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav1A0A075B5Z4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav1A0A075B5Z4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav1A0A075B5Z4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav1A0A075B5Z4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav1A0A075B5Z4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav1A0A075B5Z4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav1A0A075B5Z4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav1A0A075B5Z4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav1A0A075B5Z4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav1A0A075B5Z4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav1A0A075B5Z4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.28■□□□□ 0.04
Trav1A0A075B5Z4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav1A0A075B5Z4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav1A0A075B5Z4 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav1A0A075B5Z4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav1A0A075B5Z4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav1A0A075B5Z4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav1A0A075B5Z4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav1A0A075B5Z4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.27■□□□□ 0.04
Trav1A0A075B5Z4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trav1A0A075B5Z4 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav1A0A075B5Z4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav1A0A075B5Z4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav1A0A075B5Z4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav1A0A075B5Z4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Trav1A0A075B5Z4 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav1A0A075B5Z4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav1A0A075B5Z4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.27■□□□□ 0.04
Trav1A0A075B5Z4 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.27■□□□□ 0.04
Trav1A0A075B5Z4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav1A0A075B5Z4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav1A0A075B5Z4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav1A0A075B5Z4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav1A0A075B5Z4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav1A0A075B5Z4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav1A0A075B5Z4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav1A0A075B5Z4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav1A0A075B5Z4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav1A0A075B5Z4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav1A0A075B5Z4 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav1A0A075B5Z4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Trav1A0A075B5Z4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav1A0A075B5Z4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav1A0A075B5Z4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav1A0A075B5Z4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav1A0A075B5Z4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms