Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv4A0A075B5I2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv4A0A075B5I2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv4A0A075B5I2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv4A0A075B5I2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Trbv4A0A075B5I2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv4A0A075B5I2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv4A0A075B5I2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trbv4A0A075B5I2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv4A0A075B5I2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Trbv4A0A075B5I2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv4A0A075B5I2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.51■□□□□ 0.23
Trbv4A0A075B5I2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv4A0A075B5I2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv4A0A075B5I2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv4A0A075B5I2 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.51■□□□□ 0.23
Trbv4A0A075B5I2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv4A0A075B5I2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv4A0A075B5I2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv4A0A075B5I2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv4A0A075B5I2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv4A0A075B5I2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trbv4A0A075B5I2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv4A0A075B5I2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv4A0A075B5I2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Gm27389-201ENSMUST00000183622 195 ntBASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv4A0A075B5I2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv4A0A075B5I2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv4A0A075B5I2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv4A0A075B5I2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv4A0A075B5I2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trbv4A0A075B5I2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv4A0A075B5I2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Trbv4A0A075B5I2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv4A0A075B5I2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trbv4A0A075B5I2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.49■□□□□ 0.23
Trbv4A0A075B5I2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv4A0A075B5I2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.49■□□□□ 0.23
Trbv4A0A075B5I2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv4A0A075B5I2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.49■□□□□ 0.23
Trbv4A0A075B5I2 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.49■□□□□ 0.23
Trbv4A0A075B5I2 Gm21559-201ENSMUST00000220638 855 ntBASIC16.49■□□□□ 0.23
Trbv4A0A075B5I2 Gm8587-201ENSMUST00000076538 843 ntBASIC16.49■□□□□ 0.23
Trbv4A0A075B5I2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv4A0A075B5I2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv4A0A075B5I2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv4A0A075B5I2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv4A0A075B5I2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv4A0A075B5I2 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.49■□□□□ 0.23
Trbv4A0A075B5I2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv4A0A075B5I2 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 Gm22697-201ENSMUST00000175194 63 ntBASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.48■□□□□ 0.23
Trbv4A0A075B5I2 Gm36967-201ENSMUST00000193814 266 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms