Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.76□□□□□ -1.81
TPM1P09493 AC244098.2-201ENST00000422068 99 ntBASIC3.76□□□□□ -1.81
TPM1P09493 HMGB1P12-201ENST00000438594 598 ntBASIC3.76□□□□□ -1.81
TPM1P09493 AC009969.1-201ENST00000438726 172 ntBASIC3.76□□□□□ -1.81
TPM1P09493 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.76□□□□□ -1.81
TPM1P09493 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.76□□□□□ -1.81
TPM1P09493 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TPM1P09493 AC007967.1-201ENST00000455422 1159 ntBASIC3.76□□□□□ -1.81
TPM1P09493 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.76□□□□□ -1.81
TPM1P09493 U3.44-201ENST00000458938 192 ntBASIC3.76□□□□□ -1.81
TPM1P09493 VN1R105P-201ENST00000486595 910 ntBASIC3.76□□□□□ -1.81
TPM1P09493 AC108078.3-201ENST00000502633 489 ntBASIC3.76□□□□□ -1.81
TPM1P09493 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.76□□□□□ -1.81
TPM1P09493 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.76□□□□□ -1.81
TPM1P09493 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.76□□□□□ -1.81
TPM1P09493 AC006557.5-201ENST00000603126 811 ntBASIC3.76□□□□□ -1.81
TPM1P09493 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
TPM1P09493 RNU6-156P-201ENST00000621869 107 ntBASIC3.76□□□□□ -1.81
TPM1P09493 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
TPM1P09493 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
TPM1P09493 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
TPM1P09493 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
TPM1P09493 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.75□□□□□ -1.81
TPM1P09493 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.75□□□□□ -1.81
TPM1P09493 SNORA51.2-201ENST00000364595 132 ntBASIC3.75□□□□□ -1.81
TPM1P09493 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TPM1P09493 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
TPM1P09493 DYNLT3P1-201ENST00000378574 347 ntBASIC3.75□□□□□ -1.81
TPM1P09493 AL356806.1-201ENST00000422524 916 ntBASIC3.75□□□□□ -1.81
TPM1P09493 OR51AB1P-201ENST00000429046 620 ntBASIC3.75□□□□□ -1.81
TPM1P09493 RPL23AP69-201ENST00000431134 458 ntBASIC3.75□□□□□ -1.81
TPM1P09493 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.75□□□□□ -1.81
TPM1P09493 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.75□□□□□ -1.81
TPM1P09493 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
TPM1P09493 GAPDHP36-201ENST00000480688 918 ntBASIC3.75□□□□□ -1.81
TPM1P09493 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
TPM1P09493 AC026402.1-201ENST00000513642 170 ntBASIC3.75□□□□□ -1.81
TPM1P09493 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.75□□□□□ -1.81
TPM1P09493 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
TPM1P09493 POLR2KP1-201ENST00000553226 168 ntBASIC3.75□□□□□ -1.81
TPM1P09493 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.75□□□□□ -1.81
TPM1P09493 OR4H12P-201ENST00000556269 907 ntBASIC3.75□□□□□ -1.81
TPM1P09493 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.75□□□□□ -1.81
TPM1P09493 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.75□□□□□ -1.81
TPM1P09493 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.75□□□□□ -1.81
TPM1P09493 SNRPGP15-201ENST00000600149 222 ntBASIC3.75□□□□□ -1.81
TPM1P09493 U4.6-201ENST00000621618 127 ntBASIC3.75□□□□□ -1.81
TPM1P09493 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.75□□□□□ -1.81
TPM1P09493 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.75□□□□□ -1.81
TPM1P09493 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.75□□□□□ -1.81
TPM1P09493 AC004972.1-201ENST00000623934 2209 ntBASIC3.75□□□□□ -1.81
TPM1P09493 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
TPM1P09493 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
TPM1P09493 MAPK10-362ENST00000641864 4484 ntBASIC3.74□□□□□ -1.81
TPM1P09493 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
TPM1P09493 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.74□□□□□ -1.81
TPM1P09493 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TPM1P09493 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
TPM1P09493 RNA5SP295-201ENST00000362655 121 ntBASIC3.74□□□□□ -1.81
TPM1P09493 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
TPM1P09493 MIR591-201ENST00000385290 95 ntBASIC3.74□□□□□ -1.81
TPM1P09493 EIF5P1-201ENST00000400019 1231 ntBASIC3.74□□□□□ -1.81
TPM1P09493 RSL24D1P1-201ENST00000404972 493 ntBASIC3.74□□□□□ -1.81
TPM1P09493 TRIAP1P1-201ENST00000427062 225 ntBASIC3.74□□□□□ -1.81
TPM1P09493 NEK4P1-201ENST00000433383 879 ntBASIC3.74□□□□□ -1.81
TPM1P09493 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.74□□□□□ -1.81
TPM1P09493 AL590103.1-201ENST00000434488 307 ntBASIC3.74□□□□□ -1.81
TPM1P09493 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.74□□□□□ -1.81
TPM1P09493 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.74□□□□□ -1.81
TPM1P09493 HMGN2P16-201ENST00000456802 261 ntBASIC3.74□□□□□ -1.81
TPM1P09493 VN1R17P-201ENST00000472048 1090 ntBASIC3.74□□□□□ -1.81
TPM1P09493 RN7SL283P-201ENST00000489055 303 ntBASIC3.74□□□□□ -1.81
TPM1P09493 AC111193.1-201ENST00000504097 155 ntBASIC3.74□□□□□ -1.81
TPM1P09493 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.74□□□□□ -1.81
TPM1P09493 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.74□□□□□ -1.81
TPM1P09493 AC010198.2-201ENST00000550612 259 ntBASIC3.74□□□□□ -1.81
TPM1P09493 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.74□□□□□ -1.81
TPM1P09493 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.74□□□□□ -1.81
TPM1P09493 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.74□□□□□ -1.81
TPM1P09493 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.74□□□□□ -1.81
TPM1P09493 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.74□□□□□ -1.81
TPM1P09493 AC006116.10-201ENST00000591836 581 ntBASIC3.74□□□□□ -1.81
TPM1P09493 AL137246.1-201ENST00000607072 977 ntBASIC3.74□□□□□ -1.81
TPM1P09493 AL023583.1-201ENST00000607518 1143 ntBASIC3.74□□□□□ -1.81
TPM1P09493 MIR7851-201ENST00000610611 160 ntBASIC3.74□□□□□ -1.81
TPM1P09493 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.74□□□□□ -1.81
TPM1P09493 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.74□□□□□ -1.81
TPM1P09493 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
TPM1P09493 ELL2P4-201ENST00000446870 1376 ntBASIC3.74□□□□□ -1.81
TPM1P09493 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TPM1P09493 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TPM1P09493 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
TPM1P09493 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.73□□□□□ -1.81
TPM1P09493 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TPM1P09493 AL049693.1-201ENST00000402760 611 ntBASIC3.73□□□□□ -1.81
TPM1P09493 Z99755.1-201ENST00000414048 380 ntBASIC3.73□□□□□ -1.81
TPM1P09493 NDUFB4P5-201ENST00000415445 361 ntBASIC3.73□□□□□ -1.81
TPM1P09493 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.73□□□□□ -1.81
TPM1P09493 AL121578.1-201ENST00000428051 892 ntBASIC3.73□□□□□ -1.81
TPM1P09493 AC016712.1-201ENST00000431088 378 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms