Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.53□□□□□ -1.68
MMP3P08254 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.52□□□□□ -1.69
MMP3P08254 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
MMP3P08254 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.52□□□□□ -1.69
MMP3P08254 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
MMP3P08254 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
MMP3P08254 SNORA71.3-201ENST00000362582 128 ntBASIC4.52□□□□□ -1.69
MMP3P08254 OR52E6-202ENST00000379946 954 ntBASIC4.52□□□□□ -1.69
MMP3P08254 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.52□□□□□ -1.69
MMP3P08254 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.52□□□□□ -1.69
MMP3P08254 AC073136.2-201ENST00000417282 849 ntBASIC4.52□□□□□ -1.69
MMP3P08254 PAICSP7-201ENST00000419829 962 ntBASIC4.52□□□□□ -1.69
MMP3P08254 AC006960.1-201ENST00000419980 153 ntBASIC4.52□□□□□ -1.69
MMP3P08254 AC073335.1-201ENST00000427776 363 ntBASIC4.52□□□□□ -1.69
MMP3P08254 RPS24P8-201ENST00000431490 402 ntBASIC4.52□□□□□ -1.69
MMP3P08254 MTND1P32-201ENST00000433043 938 ntBASIC4.52□□□□□ -1.69
MMP3P08254 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.52□□□□□ -1.69
MMP3P08254 AC091564.1-201ENST00000464563 479 ntBASIC4.52□□□□□ -1.69
MMP3P08254 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.52□□□□□ -1.69
MMP3P08254 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.52□□□□□ -1.69
MMP3P08254 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.52□□□□□ -1.69
MMP3P08254 RPS27P23-201ENST00000487608 251 ntBASIC4.52□□□□□ -1.69
MMP3P08254 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.52□□□□□ -1.69
MMP3P08254 AC011352.3-201ENST00000505162 593 ntBASIC4.52□□□□□ -1.69
MMP3P08254 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.52□□□□□ -1.69
MMP3P08254 AC105313.1-201ENST00000509121 353 ntBASIC4.52□□□□□ -1.69
MMP3P08254 RNU7-143P-201ENST00000516781 65 ntBASIC4.52□□□□□ -1.69
MMP3P08254 AP003461.1-201ENST00000528866 78 ntBASIC4.52□□□□□ -1.69
MMP3P08254 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.52□□□□□ -1.69
MMP3P08254 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.52□□□□□ -1.69
MMP3P08254 NBEAP1-201ENST00000554452 979 ntBASIC4.52□□□□□ -1.69
MMP3P08254 RPL21P7-201ENST00000557463 483 ntBASIC4.52□□□□□ -1.69
MMP3P08254 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.52□□□□□ -1.69
MMP3P08254 AC068714.1-201ENST00000559623 800 ntBASIC4.52□□□□□ -1.69
MMP3P08254 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.52□□□□□ -1.69
MMP3P08254 HNRNPCP4-201ENST00000571636 900 ntBASIC4.52□□□□□ -1.69
MMP3P08254 RPL23AP87-202ENST00000573039 466 ntBASIC4.52□□□□□ -1.69
MMP3P08254 BPTFP1-201ENST00000579209 492 ntBASIC4.52□□□□□ -1.69
MMP3P08254 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.52□□□□□ -1.69
MMP3P08254 AC090312.2-201ENST00000582687 378 ntBASIC4.52□□□□□ -1.69
MMP3P08254 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.52□□□□□ -1.69
MMP3P08254 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.52□□□□□ -1.69
MMP3P08254 NTAN1P1-201ENST00000603150 646 ntBASIC4.52□□□□□ -1.69
MMP3P08254 AC008739.3-201ENST00000603262 127 ntBASIC4.52□□□□□ -1.69
MMP3P08254 AC112230.1-201ENST00000604342 547 ntBASIC4.52□□□□□ -1.69
MMP3P08254 AL158042.1-201ENST00000605338 460 ntBASIC4.52□□□□□ -1.69
MMP3P08254 SNORD91B-202ENST00000608459 222 ntBASIC4.52□□□□□ -1.69
MMP3P08254 AL450489.1-201ENST00000612071 468 ntBASIC4.52□□□□□ -1.69
MMP3P08254 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.52□□□□□ -1.69
MMP3P08254 AC023509.5-201ENST00000617434 807 ntBASIC4.52□□□□□ -1.69
MMP3P08254 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.52□□□□□ -1.69
MMP3P08254 AC022509.4-201ENST00000621404 572 ntBASIC4.52□□□□□ -1.69
MMP3P08254 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.52□□□□□ -1.69
MMP3P08254 AC116563.2-201ENST00000624751 535 ntBASIC4.52□□□□□ -1.69
MMP3P08254 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
MMP3P08254 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
MMP3P08254 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
MMP3P08254 AC119744.1-201ENST00000454746 1715 ntBASIC4.52□□□□□ -1.69
MMP3P08254 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.52□□□□□ -1.69
MMP3P08254 AC105074.1-201ENST00000623380 3095 ntBASIC4.52□□□□□ -1.69
MMP3P08254 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
MMP3P08254 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
MMP3P08254 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
MMP3P08254 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
MMP3P08254 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
MMP3P08254 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
MMP3P08254 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.51□□□□□ -1.69
MMP3P08254 MAPK10-349ENST00000641767 3661 ntBASIC4.51□□□□□ -1.69
MMP3P08254 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
MMP3P08254 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
MMP3P08254 RNA5SP387-201ENST00000364226 106 ntBASIC4.51□□□□□ -1.69
MMP3P08254 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.51□□□□□ -1.69
MMP3P08254 RNU6-157P-201ENST00000383957 107 ntBASIC4.51□□□□□ -1.69
MMP3P08254 Y_RNA.408-201ENST00000383987 102 ntBASIC4.51□□□□□ -1.69
MMP3P08254 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.51□□□□□ -1.69
MMP3P08254 RSL24D1P4-201ENST00000400938 484 ntBASIC4.51□□□□□ -1.69
MMP3P08254 AL590704.1-201ENST00000402856 794 ntBASIC4.51□□□□□ -1.69
MMP3P08254 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.51□□□□□ -1.69
MMP3P08254 RNU6-757P-201ENST00000410334 100 ntBASIC4.51□□□□□ -1.69
MMP3P08254 OR51A3P-201ENST00000413596 924 ntBASIC4.51□□□□□ -1.69
MMP3P08254 AL161449.1-201ENST00000414531 1199 ntBASIC4.51□□□□□ -1.69
MMP3P08254 AC007435.1-201ENST00000421086 415 ntBASIC4.51□□□□□ -1.69
MMP3P08254 RPL7P4-203ENST00000430239 730 ntBASIC4.51□□□□□ -1.69
MMP3P08254 GOT2P5-201ENST00000433995 546 ntBASIC4.51□□□□□ -1.69
MMP3P08254 UBE2D3P1-201ENST00000436669 444 ntBASIC4.51□□□□□ -1.69
MMP3P08254 RPL23AP89-201ENST00000439324 255 ntBASIC4.51□□□□□ -1.69
MMP3P08254 ANKRD26P4-201ENST00000455755 950 ntBASIC4.51□□□□□ -1.69
MMP3P08254 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.51□□□□□ -1.69
MMP3P08254 OR9M1P-201ENST00000459641 921 ntBASIC4.51□□□□□ -1.69
MMP3P08254 RPL7L1P8-201ENST00000469911 741 ntBASIC4.51□□□□□ -1.69
MMP3P08254 AL139099.1-201ENST00000497398 403 ntBASIC4.51□□□□□ -1.69
MMP3P08254 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.51□□□□□ -1.69
MMP3P08254 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.51□□□□□ -1.69
MMP3P08254 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
MMP3P08254 AC116353.3-201ENST00000511215 249 ntBASIC4.51□□□□□ -1.69
MMP3P08254 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.51□□□□□ -1.69
MMP3P08254 MTCO3P28-201ENST00000513351 515 ntBASIC4.51□□□□□ -1.69
MMP3P08254 Y_RNA.688-201ENST00000516565 95 ntBASIC4.51□□□□□ -1.69
MMP3P08254 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.51□□□□□ -1.69
MMP3P08254 AC008015.1-201ENST00000555505 465 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms