Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM4Q9C037 AC114967.1-201ENST00000504890 259 ntBASIC3.59□□□□□ -1.83
TRIM4Q9C037 RN7SKP18-201ENST00000516005 275 ntBASIC3.59□□□□□ -1.83
TRIM4Q9C037 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM4Q9C037 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM4Q9C037 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
TRIM4Q9C037 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM4Q9C037 OR4A12P-201ENST00000530847 918 ntBASIC3.59□□□□□ -1.83
TRIM4Q9C037 OR5B10P-201ENST00000532869 642 ntBASIC3.59□□□□□ -1.83
TRIM4Q9C037 OR4T1P-201ENST00000554933 911 ntBASIC3.59□□□□□ -1.83
TRIM4Q9C037 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM4Q9C037 NPM1P47-201ENST00000560843 856 ntBASIC3.59□□□□□ -1.83
TRIM4Q9C037 SNORA62.6-201ENST00000606322 83 ntBASIC3.59□□□□□ -1.83
TRIM4Q9C037 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM4Q9C037 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
TRIM4Q9C037 AL592494.2-201ENST00000425455 1548 ntBASIC3.59□□□□□ -1.84
TRIM4Q9C037 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM4Q9C037 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM4Q9C037 MIR124-3-201ENST00000384866 87 ntBASIC3.58□□□□□ -1.84
TRIM4Q9C037 SNORA3.3-201ENST00000408712 125 ntBASIC3.58□□□□□ -1.84
TRIM4Q9C037 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.58□□□□□ -1.84
TRIM4Q9C037 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.58□□□□□ -1.84
TRIM4Q9C037 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM4Q9C037 CYCSP53-201ENST00000455540 265 ntBASIC3.58□□□□□ -1.84
TRIM4Q9C037 SNORD108-201ENST00000459332 71 ntBASIC3.58□□□□□ -1.84
TRIM4Q9C037 RPL7P5-201ENST00000471472 736 ntBASIC3.58□□□□□ -1.84
TRIM4Q9C037 RNU2-58P-201ENST00000516403 183 ntBASIC3.58□□□□□ -1.84
TRIM4Q9C037 SUMO2P20-201ENST00000520803 283 ntBASIC3.58□□□□□ -1.84
TRIM4Q9C037 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM4Q9C037 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM4Q9C037 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM4Q9C037 AC010653.1-201ENST00000571108 881 ntBASIC3.58□□□□□ -1.84
TRIM4Q9C037 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.58□□□□□ -1.84
TRIM4Q9C037 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM4Q9C037 AC005156.1-201ENST00000613371 573 ntBASIC3.58□□□□□ -1.84
TRIM4Q9C037 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM4Q9C037 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM4Q9C037 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.58□□□□□ -1.84
TRIM4Q9C037 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM4Q9C037 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM4Q9C037 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM4Q9C037 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
TRIM4Q9C037 HSPE1P26-201ENST00000405341 275 ntBASIC3.57□□□□□ -1.84
TRIM4Q9C037 AL591419.1-201ENST00000427423 339 ntBASIC3.57□□□□□ -1.84
TRIM4Q9C037 AC097713.2-201ENST00000430199 356 ntBASIC3.57□□□□□ -1.84
TRIM4Q9C037 OR2B8P-201ENST00000432841 938 ntBASIC3.57□□□□□ -1.84
TRIM4Q9C037 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.57□□□□□ -1.84
TRIM4Q9C037 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.57□□□□□ -1.84
TRIM4Q9C037 AC009969.1-201ENST00000438726 172 ntBASIC3.57□□□□□ -1.84
TRIM4Q9C037 AC092641.1-201ENST00000440229 772 ntBASIC3.57□□□□□ -1.84
TRIM4Q9C037 UBDP1-202ENST00000457888 382 ntBASIC3.57□□□□□ -1.84
TRIM4Q9C037 RPS4XP2-201ENST00000458402 793 ntBASIC3.57□□□□□ -1.84
TRIM4Q9C037 RPL21P11-201ENST00000461458 483 ntBASIC3.57□□□□□ -1.84
TRIM4Q9C037 RN7SL807P-201ENST00000470923 297 ntBASIC3.57□□□□□ -1.84
TRIM4Q9C037 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
TRIM4Q9C037 AC108941.1-201ENST00000502853 530 ntBASIC3.57□□□□□ -1.84
TRIM4Q9C037 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.57□□□□□ -1.84
TRIM4Q9C037 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM4Q9C037 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.57□□□□□ -1.84
TRIM4Q9C037 AC068657.1-201ENST00000520807 306 ntBASIC3.57□□□□□ -1.84
TRIM4Q9C037 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.57□□□□□ -1.84
TRIM4Q9C037 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.57□□□□□ -1.84
TRIM4Q9C037 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM4Q9C037 AC006960.3-201ENST00000561845 705 ntBASIC3.57□□□□□ -1.84
TRIM4Q9C037 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.57□□□□□ -1.84
TRIM4Q9C037 AC008507.1-201ENST00000587506 734 ntBASIC3.57□□□□□ -1.84
TRIM4Q9C037 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
TRIM4Q9C037 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM4Q9C037 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM4Q9C037 AL392088.2-201ENST00000637607 285 ntBASIC3.57□□□□□ -1.84
TRIM4Q9C037 AC073073.2-201ENST00000609827 2578 ntBASIC3.57□□□□□ -1.84
TRIM4Q9C037 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM4Q9C037 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
TRIM4Q9C037 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
TRIM4Q9C037 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM4Q9C037 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM4Q9C037 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM4Q9C037 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
TRIM4Q9C037 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
TRIM4Q9C037 RNA5SP50-201ENST00000363731 107 ntBASIC3.56□□□□□ -1.84
TRIM4Q9C037 SKINT1L-201ENST00000401057 817 ntBASIC3.56□□□□□ -1.84
TRIM4Q9C037 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.56□□□□□ -1.84
TRIM4Q9C037 AC126124.2-201ENST00000413542 321 ntBASIC3.56□□□□□ -1.84
TRIM4Q9C037 NDUFB4P5-201ENST00000415445 361 ntBASIC3.56□□□□□ -1.84
TRIM4Q9C037 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM4Q9C037 AC073464.3-201ENST00000422564 712 ntBASIC3.56□□□□□ -1.84
TRIM4Q9C037 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM4Q9C037 NDUFB1P1-201ENST00000435191 180 ntBASIC3.56□□□□□ -1.84
TRIM4Q9C037 AC089999.1-201ENST00000460336 374 ntBASIC3.56□□□□□ -1.84
TRIM4Q9C037 AC091179.1-201ENST00000461606 579 ntBASIC3.56□□□□□ -1.84
TRIM4Q9C037 NPM1P17-201ENST00000479221 602 ntBASIC3.56□□□□□ -1.84
TRIM4Q9C037 AC108860.1-201ENST00000484521 383 ntBASIC3.56□□□□□ -1.84
TRIM4Q9C037 POU5F1P7-201ENST00000508759 541 ntBASIC3.56□□□□□ -1.84
TRIM4Q9C037 RPL12P22-201ENST00000519073 490 ntBASIC3.56□□□□□ -1.84
TRIM4Q9C037 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM4Q9C037 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM4Q9C037 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM4Q9C037 AC007458.1-201ENST00000542812 373 ntBASIC3.56□□□□□ -1.84
TRIM4Q9C037 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM4Q9C037 AL161713.1-201ENST00000555538 145 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms