Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL390816.3-201ENST00000604527 1066 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 AC084824.5-201ENST00000612009 413 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 VN1R9P-201ENST00000614184 867 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 uc_338.32-201ENST00000615087 172 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 AC017104.5-201ENST00000637647 639 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 AC009093.8-201ENST00000641769 292 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 AL139811.1-201ENST00000424779 2299 ntBASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLCF1Q9UBD9 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 RNA5SP119-201ENST00000362715 117 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 RNU6-481P-201ENST00000384194 107 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 SNORA51.12-201ENST00000384448 134 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 AL445183.3-201ENST00000414168 502 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 AL451062.2-201ENST00000427515 271 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 RPS26P40-201ENST00000435209 294 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 AC092170.1-201ENST00000440211 356 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 AC098824.1-201ENST00000453565 980 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 RPL32P14-201ENST00000463196 378 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 RPL7L1P8-201ENST00000469911 741 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 AC104689.1-201ENST00000473356 768 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 AC092045.1-201ENST00000495716 1231 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 AC006499.5-201ENST00000505037 514 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 AC104619.4-201ENST00000510773 249 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 OR5H4P-201ENST00000510851 923 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 IGKV2D-23-201ENST00000518179 286 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 IGKV2D-19-201ENST00000523346 262 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 CCNG2P1-201ENST00000549521 1000 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 AC095057.3-201ENST00000567102 1157 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 AC067852.4-201ENST00000590314 478 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 AC098483.2-201ENST00000603158 454 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 AP003392.5-201ENST00000607857 415 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 AC020978.9-201ENST00000624380 1141 ntBASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.31□□□□□ -1.88
CLCF1Q9UBD9 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 AL512646.1-201ENST00000269395 1077 ntBASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 RNA5SP391-201ENST00000363456 119 ntBASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 AP002784.2-201ENST00000397300 549 ntBASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 AL138878.1-201ENST00000405131 347 ntBASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 BX664727.1-201ENST00000416024 466 ntBASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 HIGD1AP12-201ENST00000427832 281 ntBASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 AC009263.1-201ENST00000441193 1239 ntBASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 PDSS1P2-201ENST00000449397 678 ntBASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 AC008379.1-201ENST00000463655 464 ntBASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 RPL21P71-201ENST00000465598 459 ntBASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 AC022034.3-201ENST00000471393 478 ntBASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 AC106707.2-201ENST00000484182 374 ntBASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 SUMO2P20-201ENST00000520803 283 ntBASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 AC139103.1-201ENST00000534696 1030 ntBASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 AL442163.2-201ENST00000553912 710 ntBASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 MIR4644-201ENST00000579929 84 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms