Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM48Q8IWZ4 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AC092162.3-201ENST00000624511 1624 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 GNG5P1-201ENST00000255500 204 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 RNA5SP507-201ENST00000363603 121 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 RNU6-921P-201ENST00000384361 107 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 SPTLC1P2-201ENST00000407089 121 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 RN7SKP285-201ENST00000410137 318 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AMD1P2-201ENST00000412936 992 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 PIGFP2-201ENST00000421400 651 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 NANOGP6-201ENST00000429190 847 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 LYPLA1P1-201ENST00000434514 622 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 MTND4LP16-201ENST00000440828 295 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 GAPDHP14-201ENST00000450472 937 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 MTND1P11-201ENST00000456661 876 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 RPL7P22-201ENST00000466005 733 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AP000852.1-201ENST00000472460 573 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AC007182.2-201ENST00000489251 402 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 RNF138P1-201ENST00000502765 546 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 RN7SKP96-201ENST00000516948 297 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AL157687.1-201ENST00000554853 619 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AC068714.1-201ENST00000559623 800 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AC044860.2-201ENST00000561005 179 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AC025678.1-201ENST00000567861 338 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AP005119.2-201ENST00000579735 1105 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 MIR4660-201ENST00000583549 74 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AL117336.2-201ENST00000602435 335 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AC073091.2-201ENST00000603205 907 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AL355816.1-201ENST00000607951 118 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AC078899.5-201ENST00000612475 178 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 RPSAP73-201ENST00000614820 330 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 MIR1321-201ENST00000637766 79 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AC010928.1-201ENST00000592477 1447 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 AC092326.2-201ENST00000624772 1561 ntBASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM48Q8IWZ4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 CCT4P2-201ENST00000233836 1548 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 RNU6-1085P-201ENST00000363576 107 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 RNU6-877P-201ENST00000383868 107 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 SNORA70-201ENST00000384436 135 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 RNU6-1009P-201ENST00000390996 107 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 SNORD115.1-201ENST00000391109 76 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 EIF5P1-201ENST00000400019 1231 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 DBIP1-201ENST00000401435 260 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 HMGB1P17-201ENST00000403495 628 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 PPIAP9-201ENST00000403866 498 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 MTCO1P17-201ENST00000411522 491 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 AL359704.1-201ENST00000411586 781 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 JKAMPP1-201ENST00000413804 919 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 TPMTP2-201ENST00000414372 726 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 RPL36P19-201ENST00000430744 301 ntBASIC5.19□□□□□ -1.58
TRIM48Q8IWZ4 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms