Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC2.55□□□□□ -2
SCXQ7RTU7 AL513174.1-201ENST00000423182 629 ntBASIC2.55□□□□□ -2
SCXQ7RTU7 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.55□□□□□ -2
SCXQ7RTU7 MTND4P24-201ENST00000424002 397 ntBASIC2.55□□□□□ -2
SCXQ7RTU7 AL365396.1-201ENST00000430854 671 ntBASIC2.55□□□□□ -2
SCXQ7RTU7 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.55□□□□□ -2
SCXQ7RTU7 VDAC1P3-201ENST00000434069 851 ntBASIC2.55□□□□□ -2
SCXQ7RTU7 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC2.55□□□□□ -2
SCXQ7RTU7 TBCAP1-201ENST00000436520 327 ntBASIC2.55□□□□□ -2
SCXQ7RTU7 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.55□□□□□ -2
SCXQ7RTU7 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.55□□□□□ -2
SCXQ7RTU7 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC2.55□□□□□ -2
SCXQ7RTU7 RPL6P5-201ENST00000445678 828 ntBASIC2.55□□□□□ -2
SCXQ7RTU7 AL133547.1-201ENST00000448546 220 ntBASIC2.55□□□□□ -2
SCXQ7RTU7 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC2.55□□□□□ -2
SCXQ7RTU7 SLC31A1P1-201ENST00000451221 567 ntBASIC2.55□□□□□ -2
SCXQ7RTU7 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.55□□□□□ -2
SCXQ7RTU7 NF1P3-201ENST00000457709 450 ntBASIC2.55□□□□□ -2
SCXQ7RTU7 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
SCXQ7RTU7 TRBV8-2-201ENST00000475637 270 ntBASIC2.55□□□□□ -2
SCXQ7RTU7 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC2.55□□□□□ -2
SCXQ7RTU7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.55□□□□□ -2
SCXQ7RTU7 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC2.55□□□□□ -2
SCXQ7RTU7 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC2.55□□□□□ -2
SCXQ7RTU7 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.55□□□□□ -2
SCXQ7RTU7 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.55□□□□□ -2
SCXQ7RTU7 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC2.55□□□□□ -2
SCXQ7RTU7 OR5AK3P-201ENST00000527486 1297 ntBASIC2.55□□□□□ -2
SCXQ7RTU7 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.55□□□□□ -2
SCXQ7RTU7 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC2.55□□□□□ -2
SCXQ7RTU7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
SCXQ7RTU7 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.55□□□□□ -2
SCXQ7RTU7 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC2.55□□□□□ -2
SCXQ7RTU7 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.55□□□□□ -2
SCXQ7RTU7 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.55□□□□□ -2
SCXQ7RTU7 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.55□□□□□ -2
SCXQ7RTU7 AC112230.1-201ENST00000604342 547 ntBASIC2.55□□□□□ -2
SCXQ7RTU7 AC114878.2-201ENST00000604863 1251 ntBASIC2.55□□□□□ -2
SCXQ7RTU7 AP000255.1-201ENST00000610276 676 ntBASIC2.55□□□□□ -2
SCXQ7RTU7 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.55□□□□□ -2
SCXQ7RTU7 CR392039.5-201ENST00000623201 510 ntBASIC2.55□□□□□ -2
SCXQ7RTU7 AC090617.9-201ENST00000623751 147 ntBASIC2.55□□□□□ -2
SCXQ7RTU7 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC2.55□□□□□ -2
SCXQ7RTU7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.55□□□□□ -2
SCXQ7RTU7 AF001550.2-201ENST00000636643 217 ntBASIC2.55□□□□□ -2
SCXQ7RTU7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
SCXQ7RTU7 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC2.55□□□□□ -2
SCXQ7RTU7 AC007256.1-201ENST00000392253 2765 ntBASIC2.55□□□□□ -2
SCXQ7RTU7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
SCXQ7RTU7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
SCXQ7RTU7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC2.54□□□□□ -2
SCXQ7RTU7 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
SCXQ7RTU7 NSRP1P1-201ENST00000444067 1693 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC2.54□□□□□ -2
SCXQ7RTU7 AP002001.2-201ENST00000529025 1469 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.54□□□□□ -2
SCXQ7RTU7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC2.54□□□□□ -2
SCXQ7RTU7 AL512646.1-201ENST00000269395 1077 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 OR4A15-201ENST00000314706 1035 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
SCXQ7RTU7 PARD3-204ENST00000374768 799 ntTSL 3 BASIC2.54□□□□□ -2
SCXQ7RTU7 MIR591-201ENST00000385290 95 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 EI24P2-201ENST00000397776 1076 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 MTCO3P31-201ENST00000405526 789 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 SNORA57.3-201ENST00000411095 141 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SCXQ7RTU7 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.54□□□□□ -2
SCXQ7RTU7 AL358472.1-201ENST00000431295 329 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 TRIM60P13-201ENST00000432350 1283 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC2.54□□□□□ -2
SCXQ7RTU7 YWHAZP8-201ENST00000436935 731 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.54□□□□□ -2
SCXQ7RTU7 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.54□□□□□ -2
SCXQ7RTU7 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC2.54□□□□□ -2
SCXQ7RTU7 AL358232.1-201ENST00000448030 501 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 RPL7P52-201ENST00000449200 742 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 Z99714.1-201ENST00000450463 807 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 RPS11P1-201ENST00000451072 473 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 RAD23BP3-201ENST00000454157 1152 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.54□□□□□ -2
SCXQ7RTU7 OR9M1P-201ENST00000459641 921 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.54□□□□□ -2
SCXQ7RTU7 AC022034.3-201ENST00000471393 478 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 RPS27AP1-201ENST00000475545 471 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 AC093663.2-201ENST00000484625 313 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.54□□□□□ -2
SCXQ7RTU7 RPL7L1P13-201ENST00000511702 739 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 RNU7-143P-201ENST00000516781 65 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 RN7SKP96-201ENST00000516948 297 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 IGKV2-38-201ENST00000517443 247 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 RPL12P22-201ENST00000519073 490 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 OR4R3P-201ENST00000525084 838 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.54□□□□□ -2
SCXQ7RTU7 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.54□□□□□ -2
SCXQ7RTU7 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.54□□□□□ -2
SCXQ7RTU7 AC053481.3-201ENST00000577881 843 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.54□□□□□ -2
SCXQ7RTU7 AL355802.4-201ENST00000607635 548 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 AP003392.5-201ENST00000607857 415 ntBASIC2.54□□□□□ -2
SCXQ7RTU7 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms