Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 SNRPEP6-201ENST00000407465 277 ntBASIC8.3□□□□□ -1.08
PHF8Q9UPP1 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 AL662874.1-201ENST00000426065 230 ntBASIC8.3□□□□□ -1.08
PHF8Q9UPP1 CEP57L1P1-201ENST00000430943 1201 ntBASIC8.3□□□□□ -1.08
PHF8Q9UPP1 AC126120.1-201ENST00000431082 470 ntBASIC8.3□□□□□ -1.08
PHF8Q9UPP1 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 AC135001.1-201ENST00000544546 283 ntBASIC8.3□□□□□ -1.08
PHF8Q9UPP1 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 AP001486.3-201ENST00000615334 372 ntBASIC8.3□□□□□ -1.08
PHF8Q9UPP1 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 TCP11X1-202ENST00000622971 1372 ntBASIC8.3□□□□□ -1.08
PHF8Q9UPP1 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 AC245100.2-201ENST00000454544 1679 ntBASIC8.3□□□□□ -1.08
PHF8Q9UPP1 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 CASC19-204ENST00000641001 2055 ntBASIC8.3□□□□□ -1.08
PHF8Q9UPP1 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 AC235565.1-201ENST00000456962 1325 ntBASIC8.29□□□□□ -1.08
PHF8Q9UPP1 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 MAPK10-261ENST00000641050 3109 ntBASIC8.29□□□□□ -1.08
PHF8Q9UPP1 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 RNY3P13-201ENST00000365542 102 ntBASIC8.29□□□□□ -1.08
PHF8Q9UPP1 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 RNU6-1050P-201ENST00000410388 107 ntBASIC8.29□□□□□ -1.08
PHF8Q9UPP1 RNU2-23P-201ENST00000410545 195 ntBASIC8.29□□□□□ -1.08
PHF8Q9UPP1 RN7SKP235-201ENST00000410662 305 ntBASIC8.29□□□□□ -1.08
PHF8Q9UPP1 AL133384.1-201ENST00000412744 351 ntBASIC8.29□□□□□ -1.08
PHF8Q9UPP1 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 AC008280.1-201ENST00000418851 412 ntBASIC8.29□□□□□ -1.08
PHF8Q9UPP1 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 AL590135.1-201ENST00000422215 156 ntBASIC8.29□□□□□ -1.08
PHF8Q9UPP1 RPS15AP10-201ENST00000432472 382 ntBASIC8.29□□□□□ -1.08
PHF8Q9UPP1 AC092013.1-201ENST00000438795 332 ntBASIC8.29□□□□□ -1.08
PHF8Q9UPP1 AC019185.1-201ENST00000442718 389 ntBASIC8.29□□□□□ -1.08
PHF8Q9UPP1 SIAH1P1-201ENST00000479411 923 ntBASIC8.29□□□□□ -1.08
PHF8Q9UPP1 AC096754.1-201ENST00000508904 818 ntBASIC8.29□□□□□ -1.08
PHF8Q9UPP1 AP006245.2-201ENST00000522004 300 ntBASIC8.29□□□□□ -1.08
PHF8Q9UPP1 IGHV3-76-201ENST00000522465 295 ntBASIC8.29□□□□□ -1.08
PHF8Q9UPP1 HMGN2P36-201ENST00000529541 409 ntBASIC8.29□□□□□ -1.08
PHF8Q9UPP1 OR5D17P-201ENST00000531492 978 ntBASIC8.29□□□□□ -1.08
PHF8Q9UPP1 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 AC073916.1-201ENST00000545095 130 ntBASIC8.29□□□□□ -1.08
PHF8Q9UPP1 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 SETP2-201ENST00000553886 926 ntBASIC8.29□□□□□ -1.08
PHF8Q9UPP1 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 Z98751.3-201ENST00000604447 521 ntBASIC8.29□□□□□ -1.08
PHF8Q9UPP1 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 AC244517.1-201ENST00000606030 2086 ntBASIC8.29□□□□□ -1.08
PHF8Q9UPP1 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
PHF8Q9UPP1 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 U3.11-201ENST00000364476 212 ntBASIC8.28□□□□□ -1.08
PHF8Q9UPP1 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 RNU6-641P-201ENST00000384006 107 ntBASIC8.28□□□□□ -1.08
PHF8Q9UPP1 Y_RNA.478-201ENST00000384358 107 ntBASIC8.28□□□□□ -1.08
PHF8Q9UPP1 Y_RNA.562-201ENST00000384695 113 ntBASIC8.28□□□□□ -1.08
PHF8Q9UPP1 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 AL445529.1-201ENST00000398713 389 ntBASIC8.28□□□□□ -1.08
PHF8Q9UPP1 SPTLC1P2-201ENST00000407089 121 ntBASIC8.28□□□□□ -1.08
PHF8Q9UPP1 NMD3P2-201ENST00000421815 761 ntBASIC8.28□□□□□ -1.08
PHF8Q9UPP1 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC8.28□□□□□ -1.08
PHF8Q9UPP1 AL359265.2-201ENST00000434367 631 ntBASIC8.28□□□□□ -1.08
PHF8Q9UPP1 RPS26P40-201ENST00000435209 294 ntBASIC8.28□□□□□ -1.08
PHF8Q9UPP1 AC112492.4-201ENST00000456549 352 ntBASIC8.28□□□□□ -1.08
PHF8Q9UPP1 HMGB3P30-201ENST00000457863 606 ntBASIC8.28□□□□□ -1.08
PHF8Q9UPP1 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms