Protein–RNA interactions for Protein: Q12860

CNTN1, Contactin-1, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1Q12860 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNTN1Q12860 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CNTN1Q12860 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNTN1Q12860 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNTN1Q12860 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.94□□□□□ -1.78
CNTN1Q12860 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.94□□□□□ -1.78
CNTN1Q12860 AL512646.1-201ENST00000269395 1077 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 OR4A15-201ENST00000314706 1035 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 RNA5SP97-201ENST00000365006 84 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 PTMAP2-201ENST00000397627 327 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 RN7SKP156-201ENST00000410308 342 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 RPL7AP73-201ENST00000413490 353 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.94□□□□□ -1.78
CNTN1Q12860 AL389915.1-201ENST00000422463 466 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 AC018644.1-201ENST00000429934 551 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 RPS26P40-201ENST00000435209 294 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.94□□□□□ -1.78
CNTN1Q12860 AL353748.1-201ENST00000440753 474 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 AC096992.1-201ENST00000459808 709 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 AC015724.1-201ENST00000478577 156 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 FTH1P24-201ENST00000503502 462 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 AC119751.1-201ENST00000513357 765 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 AC093853.1-201ENST00000515689 483 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 RNU6-416P-201ENST00000516265 103 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 IGKV2-38-201ENST00000517443 247 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.94□□□□□ -1.78
CNTN1Q12860 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.94□□□□□ -1.78
CNTN1Q12860 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.94□□□□□ -1.78
CNTN1Q12860 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CNTN1Q12860 ZNF971P-201ENST00000562068 1249 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.94□□□□□ -1.78
CNTN1Q12860 AL606834.3-201ENST00000602615 496 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 AC069304.3-201ENST00000603938 1084 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 AC112230.1-201ENST00000604342 547 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 MIR92B-201ENST00000607575 96 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.94□□□□□ -1.78
CNTN1Q12860 AC084824.4-201ENST00000620106 731 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 AL139089.1-201ENST00000620372 975 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 CR392039.5-201ENST00000623201 510 ntBASIC3.94□□□□□ -1.78
CNTN1Q12860 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.94□□□□□ -1.78
CNTN1Q12860 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
CNTN1Q12860 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CNTN1Q12860 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
CNTN1Q12860 RNA5SP124-201ENST00000362739 110 ntBASIC3.93□□□□□ -1.78
CNTN1Q12860 RNU6-549P-201ENST00000384433 107 ntBASIC3.93□□□□□ -1.78
CNTN1Q12860 SNORA51.12-201ENST00000384448 134 ntBASIC3.93□□□□□ -1.78
CNTN1Q12860 RPL7P27-201ENST00000403775 720 ntBASIC3.93□□□□□ -1.78
CNTN1Q12860 SNORA3C-201ENST00000408792 125 ntBASIC3.93□□□□□ -1.78
CNTN1Q12860 MTND2P15-201ENST00000418575 892 ntBASIC3.93□□□□□ -1.78
CNTN1Q12860 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.93□□□□□ -1.78
CNTN1Q12860 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CNTN1Q12860 RPL21P110-201ENST00000433345 446 ntBASIC3.93□□□□□ -1.78
CNTN1Q12860 AL035246.1-201ENST00000433554 1255 ntBASIC3.93□□□□□ -1.78
CNTN1Q12860 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CNTN1Q12860 NOTCH2P1-201ENST00000443481 624 ntBASIC3.93□□□□□ -1.78
CNTN1Q12860 AL592437.1-201ENST00000443781 492 ntBASIC3.93□□□□□ -1.78
CNTN1Q12860 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.93□□□□□ -1.78
CNTN1Q12860 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.93□□□□□ -1.78
CNTN1Q12860 AC023050.1-201ENST00000498198 304 ntBASIC3.93□□□□□ -1.78
CNTN1Q12860 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.93□□□□□ -1.78
CNTN1Q12860 IGLVIV-53-201ENST00000520107 367 ntBASIC3.93□□□□□ -1.78
CNTN1Q12860 AC087369.1-201ENST00000520775 996 ntBASIC3.93□□□□□ -1.78
CNTN1Q12860 AC010376.1-201ENST00000522101 334 ntBASIC3.93□□□□□ -1.78
CNTN1Q12860 AC084757.1-201ENST00000559987 490 ntBASIC3.93□□□□□ -1.78
CNTN1Q12860 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.93□□□□□ -1.78
CNTN1Q12860 AL121772.2-201ENST00000614331 297 ntBASIC3.93□□□□□ -1.78
CNTN1Q12860 AC103858.2-201ENST00000621471 543 ntBASIC3.93□□□□□ -1.78
CNTN1Q12860 AC112200.1-201ENST00000625015 234 ntBASIC3.93□□□□□ -1.78
CNTN1Q12860 AL773545.4-201ENST00000637262 310 ntBASIC3.93□□□□□ -1.78
CNTN1Q12860 OR8B1P-202ENST00000641132 1178 ntBASIC3.93□□□□□ -1.78
CNTN1Q12860 AL513478.4-201ENST00000641636 310 ntBASIC3.93□□□□□ -1.78
CNTN1Q12860 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.93□□□□□ -1.78
CNTN1Q12860 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
CNTN1Q12860 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.93□□□□□ -1.78
CNTN1Q12860 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.93□□□□□ -1.78
CNTN1Q12860 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.93□□□□□ -1.78
CNTN1Q12860 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
CNTN1Q12860 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.93□□□□□ -1.78
CNTN1Q12860 OR11H5P-202ENST00000641612 1325 ntBASIC3.93□□□□□ -1.78
CNTN1Q12860 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
CNTN1Q12860 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CNTN1Q12860 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CNTN1Q12860 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CNTN1Q12860 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.92□□□□□ -1.78
CNTN1Q12860 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CNTN1Q12860 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CNTN1Q12860 SNORA3.3-201ENST00000408712 125 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 SNORA57.3-201ENST00000411095 141 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.92□□□□□ -1.78
CNTN1Q12860 USP9YP21-201ENST00000420603 432 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.92□□□□□ -1.78
CNTN1Q12860 AL009174.1-201ENST00000426577 416 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.92□□□□□ -1.78
CNTN1Q12860 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.92□□□□□ -1.78
CNTN1Q12860 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 RPS6P12-201ENST00000432491 726 ntBASIC3.92□□□□□ -1.78
CNTN1Q12860 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.92□□□□□ -1.78
CNTN1Q12860 GOT2P5-201ENST00000433995 546 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms