Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SDCBPP2-201ENST00000424643 885 ntBASIC4.42□□□□□ -1.7
SNED1Q8TER0 AL445528.1-201ENST00000426330 420 ntBASIC4.42□□□□□ -1.7
SNED1Q8TER0 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.42□□□□□ -1.7
SNED1Q8TER0 AC087650.1-201ENST00000431445 468 ntBASIC4.42□□□□□ -1.7
SNED1Q8TER0 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.42□□□□□ -1.7
SNED1Q8TER0 Z99714.1-201ENST00000450463 807 ntBASIC4.42□□□□□ -1.7
SNED1Q8TER0 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.42□□□□□ -1.7
SNED1Q8TER0 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.42□□□□□ -1.7
SNED1Q8TER0 AC025518.1-201ENST00000479856 347 ntBASIC4.42□□□□□ -1.7
SNED1Q8TER0 NPM1P29-201ENST00000483112 803 ntBASIC4.42□□□□□ -1.7
SNED1Q8TER0 ATG10-AS1-201ENST00000504846 648 ntBASIC4.42□□□□□ -1.7
SNED1Q8TER0 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.42□□□□□ -1.7
SNED1Q8TER0 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.42□□□□□ -1.7
SNED1Q8TER0 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.42□□□□□ -1.7
SNED1Q8TER0 RFPL4AP5-201ENST00000514977 504 ntBASIC4.42□□□□□ -1.7
SNED1Q8TER0 RN7SKP265-201ENST00000516448 223 ntBASIC4.42□□□□□ -1.7
SNED1Q8TER0 DUXAP5-201ENST00000529668 529 ntBASIC4.42□□□□□ -1.7
SNED1Q8TER0 AC024224.1-201ENST00000538284 609 ntBASIC4.42□□□□□ -1.7
SNED1Q8TER0 EIF4BP1-201ENST00000554881 351 ntBASIC4.42□□□□□ -1.7
SNED1Q8TER0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.42□□□□□ -1.7
SNED1Q8TER0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.42□□□□□ -1.7
SNED1Q8TER0 AP005262.1-201ENST00000582646 997 ntBASIC4.42□□□□□ -1.7
SNED1Q8TER0 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.42□□□□□ -1.7
SNED1Q8TER0 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.42□□□□□ -1.7
SNED1Q8TER0 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.42□□□□□ -1.7
SNED1Q8TER0 AC006116.10-201ENST00000591836 581 ntBASIC4.42□□□□□ -1.7
SNED1Q8TER0 BNIP3P24-201ENST00000593398 557 ntBASIC4.42□□□□□ -1.7
SNED1Q8TER0 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SNED1Q8TER0 AC018926.1-201ENST00000616335 435 ntBASIC4.42□□□□□ -1.7
SNED1Q8TER0 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.42□□□□□ -1.7
SNED1Q8TER0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.42□□□□□ -1.7
SNED1Q8TER0 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.42□□□□□ -1.7
SNED1Q8TER0 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.42□□□□□ -1.7
SNED1Q8TER0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SNED1Q8TER0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNED1Q8TER0 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNED1Q8TER0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SNED1Q8TER0 AC093535.2-201ENST00000624769 2326 ntBASIC4.42□□□□□ -1.7
SNED1Q8TER0 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.41□□□□□ -1.7
SNED1Q8TER0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SNED1Q8TER0 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNED1Q8TER0 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.41□□□□□ -1.7
SNED1Q8TER0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SNED1Q8TER0 RNA5SP374-201ENST00000362939 125 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNED1Q8TER0 MIR93-201ENST00000385024 80 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 SNORD65-201ENST00000391079 73 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SNED1Q8TER0 AL356057.1-202ENST00000402263 756 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.41□□□□□ -1.7
SNED1Q8TER0 MORF4L1P7-201ENST00000426038 703 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.41□□□□□ -1.7
SNED1Q8TER0 Z83846.1-201ENST00000446798 265 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 AC243772.1-201ENST00000451620 410 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 MTND2P6-201ENST00000455337 1030 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 RPL37P3-201ENST00000456825 293 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 AC096992.1-201ENST00000459808 709 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 AC104629.2-201ENST00000468627 598 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.41□□□□□ -1.7
SNED1Q8TER0 AC010627.1-201ENST00000503819 1294 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 PRELID3BP6-201ENST00000503839 571 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 AC105313.1-201ENST00000509121 353 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 RN7SKP287-201ENST00000516546 266 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 AC104997.1-201ENST00000519761 717 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.41□□□□□ -1.7
SNED1Q8TER0 AC233266.2-201ENST00000567067 528 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 AGGF1P5-201ENST00000567900 919 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.41□□□□□ -1.7
SNED1Q8TER0 AC068620.3-201ENST00000602749 560 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 AC093424.1-201ENST00000604999 338 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 AC064807.4-201ENST00000607201 407 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 AC106052.1-201ENST00000608029 497 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.41□□□□□ -1.7
SNED1Q8TER0 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.41□□□□□ -1.7
SNED1Q8TER0 AL163051.2-201ENST00000618976 735 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 AL078595.3-201ENST00000623815 1166 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 AC026422.1-201ENST00000623961 452 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 AC068137.4-201ENST00000638485 296 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 AL596275.2-204ENST00000641628 552 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 AL596275.2-206ENST00000641957 626 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.41□□□□□ -1.7
SNED1Q8TER0 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SNED1Q8TER0 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SNED1Q8TER0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SNED1Q8TER0 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SNED1Q8TER0 AL645568.2-201ENST00000432815 1337 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNED1Q8TER0 AL450326.2-201ENST00000421913 1962 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SNED1Q8TER0 BX005019.1-201ENST00000561881 1810 ntBASIC4.41□□□□□ -1.7
SNED1Q8TER0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SNED1Q8TER0 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
SNED1Q8TER0 AC090337.1-201ENST00000579651 2074 ntBASIC4.4□□□□□ -1.7
SNED1Q8TER0 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SNED1Q8TER0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SNED1Q8TER0 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
SNED1Q8TER0 SNORD74.4-201ENST00000364129 80 ntBASIC4.4□□□□□ -1.7
SNED1Q8TER0 MTCO2P31-201ENST00000402702 684 ntBASIC4.4□□□□□ -1.7
SNED1Q8TER0 AL512504.1-201ENST00000415494 778 ntBASIC4.4□□□□□ -1.7
SNED1Q8TER0 MTCYBP7-201ENST00000419540 1134 ntBASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms