Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC2.95□□□□□ -1.94
SPTA1P02549 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.95□□□□□ -1.94
SPTA1P02549 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SPTA1P02549 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC2.95□□□□□ -1.94
SPTA1P02549 RPS29P21-201ENST00000496272 170 ntBASIC2.95□□□□□ -1.94
SPTA1P02549 PCBP2P3-201ENST00000509726 843 ntBASIC2.95□□□□□ -1.94
SPTA1P02549 AC234778.2-201ENST00000566241 354 ntBASIC2.95□□□□□ -1.94
SPTA1P02549 RN7SL371P-201ENST00000578099 267 ntBASIC2.95□□□□□ -1.94
SPTA1P02549 AC005242.1-201ENST00000585658 438 ntBASIC2.95□□□□□ -1.94
SPTA1P02549 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SPTA1P02549 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.95□□□□□ -1.94
SPTA1P02549 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
SPTA1P02549 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SPTA1P02549 RNU1-108P-201ENST00000362556 161 ntBASIC2.94□□□□□ -1.94
SPTA1P02549 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SPTA1P02549 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC2.94□□□□□ -1.94
SPTA1P02549 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.94□□□□□ -1.94
SPTA1P02549 ARL6IP1P2-201ENST00000431356 563 ntBASIC2.94□□□□□ -1.94
SPTA1P02549 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC2.94□□□□□ -1.94
SPTA1P02549 RNA5SP367-201ENST00000516557 118 ntBASIC2.94□□□□□ -1.94
SPTA1P02549 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.94□□□□□ -1.94
SPTA1P02549 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.94□□□□□ -1.94
SPTA1P02549 OR6R2P-201ENST00000609216 300 ntBASIC2.94□□□□□ -1.94
SPTA1P02549 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.94□□□□□ -1.94
SPTA1P02549 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
SPTA1P02549 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
SPTA1P02549 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SPTA1P02549 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC2.94□□□□□ -1.94
SPTA1P02549 AC000403.1-201ENST00000613696 3585 ntBASIC2.94□□□□□ -1.94
SPTA1P02549 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.94□□□□□ -1.94
SPTA1P02549 HDGFP1-201ENST00000405943 252 ntBASIC2.94□□□□□ -1.94
SPTA1P02549 HMGB3P20-201ENST00000417997 600 ntBASIC2.94□□□□□ -1.94
SPTA1P02549 AC008264.1-201ENST00000447612 367 ntBASIC2.94□□□□□ -1.94
SPTA1P02549 AC005008.1-201ENST00000456151 612 ntBASIC2.94□□□□□ -1.94
SPTA1P02549 UBA52P3-201ENST00000491303 382 ntBASIC2.94□□□□□ -1.94
SPTA1P02549 DUXAP6-201ENST00000553858 601 ntBASIC2.94□□□□□ -1.94
SPTA1P02549 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC2.94□□□□□ -1.94
SPTA1P02549 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SPTA1P02549 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC2.94□□□□□ -1.94
SPTA1P02549 AC104446.1-201ENST00000613728 1321 ntBASIC2.93□□□□□ -1.94
SPTA1P02549 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SPTA1P02549 SNORA67.4-201ENST00000384688 142 ntBASIC2.93□□□□□ -1.94
SPTA1P02549 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC2.93□□□□□ -1.94
SPTA1P02549 AC000041.1-201ENST00000439655 175 ntBASIC2.93□□□□□ -1.94
SPTA1P02549 AC093156.1-201ENST00000440382 670 ntBASIC2.93□□□□□ -1.94
SPTA1P02549 UBE2V2P4-201ENST00000447495 259 ntBASIC2.93□□□□□ -1.94
SPTA1P02549 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC2.93□□□□□ -1.94
SPTA1P02549 RNU4-29P-201ENST00000515943 174 ntBASIC2.93□□□□□ -1.94
SPTA1P02549 RNU6-513P-201ENST00000516104 104 ntBASIC2.93□□□□□ -1.94
SPTA1P02549 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC2.93□□□□□ -1.94
SPTA1P02549 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.93□□□□□ -1.94
SPTA1P02549 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
SPTA1P02549 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SPTA1P02549 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SPTA1P02549 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC2.93□□□□□ -1.94
SPTA1P02549 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SPTA1P02549 RNA5SP52-201ENST00000362448 134 ntBASIC2.93□□□□□ -1.94
SPTA1P02549 SNORA9.2-201ENST00000365361 133 ntBASIC2.93□□□□□ -1.94
SPTA1P02549 HLFP1-201ENST00000402375 499 ntBASIC2.93□□□□□ -1.94
SPTA1P02549 RN7SKP220-201ENST00000410611 288 ntBASIC2.93□□□□□ -1.94
SPTA1P02549 DBIP2-201ENST00000419076 262 ntBASIC2.93□□□□□ -1.94
SPTA1P02549 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.93□□□□□ -1.94
SPTA1P02549 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC2.93□□□□□ -1.94
SPTA1P02549 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.93□□□□□ -1.94
SPTA1P02549 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.93□□□□□ -1.94
SPTA1P02549 VN1R90P-201ENST00000595717 726 ntBASIC2.93□□□□□ -1.94
SPTA1P02549 AL096803.3-201ENST00000609032 532 ntBASIC2.93□□□□□ -1.94
SPTA1P02549 AC005332.5-201ENST00000591222 2919 ntBASIC2.93□□□□□ -1.94
SPTA1P02549 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.92□□□□□ -1.94
SPTA1P02549 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC2.92□□□□□ -1.94
SPTA1P02549 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SPTA1P02549 AC046144.1-201ENST00000478559 1853 ntBASIC2.92□□□□□ -1.94
SPTA1P02549 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
SPTA1P02549 U3.12-201ENST00000364498 214 ntBASIC2.92□□□□□ -1.94
SPTA1P02549 TRGV5P-201ENST00000419915 354 ntBASIC2.92□□□□□ -1.94
SPTA1P02549 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.92□□□□□ -1.94
SPTA1P02549 MYL8P-204ENST00000431574 518 ntBASIC2.92□□□□□ -1.94
SPTA1P02549 YWHAQP9-201ENST00000445891 512 ntBASIC2.92□□□□□ -1.94
SPTA1P02549 HMGN2P7-201ENST00000456186 273 ntBASIC2.92□□□□□ -1.94
SPTA1P02549 AC068724.1-201ENST00000487100 792 ntBASIC2.92□□□□□ -1.94
SPTA1P02549 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.92□□□□□ -1.94
SPTA1P02549 AL162574.2-201ENST00000614618 657 ntBASIC2.92□□□□□ -1.94
SPTA1P02549 AC103798.2-201ENST00000624292 632 ntBASIC2.92□□□□□ -1.94
SPTA1P02549 MIR622-201ENST00000638396 96 ntBASIC2.92□□□□□ -1.94
SPTA1P02549 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SPTA1P02549 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.92□□□□□ -1.94
SPTA1P02549 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
SPTA1P02549 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.92□□□□□ -1.94
SPTA1P02549 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SPTA1P02549 U8.2-201ENST00000363156 134 ntBASIC2.92□□□□□ -1.94
SPTA1P02549 Y_RNA.796-201ENST00000364268 102 ntBASIC2.92□□□□□ -1.94
SPTA1P02549 Y_RNA.799-201ENST00000364992 102 ntBASIC2.92□□□□□ -1.94
SPTA1P02549 Z99755.1-201ENST00000414048 380 ntBASIC2.92□□□□□ -1.94
SPTA1P02549 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC2.92□□□□□ -1.94
SPTA1P02549 AC233981.1-201ENST00000423224 461 ntBASIC2.92□□□□□ -1.94
SPTA1P02549 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.92□□□□□ -1.94
SPTA1P02549 NPM1P17-201ENST00000479221 602 ntBASIC2.92□□□□□ -1.94
SPTA1P02549 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SPTA1P02549 AL157817.1-201ENST00000614264 790 ntBASIC2.92□□□□□ -1.94
SPTA1P02549 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms