Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.7□□□□□ -1.66
NPC1L1Q9UHC9 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.7□□□□□ -1.66
NPC1L1Q9UHC9 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.7□□□□□ -1.66
NPC1L1Q9UHC9 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.7□□□□□ -1.66
NPC1L1Q9UHC9 RPL23AP61-201ENST00000623642 466 ntBASIC4.7□□□□□ -1.66
NPC1L1Q9UHC9 AC145207.9-201ENST00000623802 325 ntBASIC4.7□□□□□ -1.66
NPC1L1Q9UHC9 AL118508.4-201ENST00000624142 1176 ntBASIC4.7□□□□□ -1.66
NPC1L1Q9UHC9 AC127502.3-201ENST00000636170 1206 ntBASIC4.7□□□□□ -1.66
NPC1L1Q9UHC9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NPC1L1Q9UHC9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NPC1L1Q9UHC9 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 AC009313.2-201ENST00000417893 1941 ntBASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 RNA5SP235-201ENST00000365411 114 ntBASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 MIR490-201ENST00000384865 128 ntBASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 RPL26P37-201ENST00000411983 438 ntBASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 FAM204CP-201ENST00000424489 642 ntBASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 CACYBPP1-201ENST00000438592 684 ntBASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 MTCYBP12-201ENST00000440559 1134 ntBASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 AL357552.1-201ENST00000445254 415 ntBASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 AP000563.1-201ENST00000490865 758 ntBASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 RNU6-889P-201ENST00000517189 103 ntBASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 AC005000.2-201ENST00000605468 310 ntBASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 AL162233.1-201ENST00000620014 944 ntBASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.69□□□□□ -1.66
NPC1L1Q9UHC9 Y_RNA.111-201ENST00000363248 100 ntBASIC4.68□□□□□ -1.66
NPC1L1Q9UHC9 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPC1L1Q9UHC9 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.68□□□□□ -1.66
NPC1L1Q9UHC9 AL157827.1-201ENST00000447622 132 ntBASIC4.68□□□□□ -1.66
NPC1L1Q9UHC9 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.68□□□□□ -1.66
NPC1L1Q9UHC9 CYCSP35-201ENST00000451978 304 ntBASIC4.68□□□□□ -1.66
NPC1L1Q9UHC9 HSPD1P15-201ENST00000505573 1122 ntBASIC4.68□□□□□ -1.66
NPC1L1Q9UHC9 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.68□□□□□ -1.66
NPC1L1Q9UHC9 AC018797.3-201ENST00000513388 1241 ntBASIC4.68□□□□□ -1.66
NPC1L1Q9UHC9 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.68□□□□□ -1.66
NPC1L1Q9UHC9 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.68□□□□□ -1.66
NPC1L1Q9UHC9 AC091515.1-201ENST00000548110 679 ntBASIC4.68□□□□□ -1.66
NPC1L1Q9UHC9 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.68□□□□□ -1.66
NPC1L1Q9UHC9 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.68□□□□□ -1.66
NPC1L1Q9UHC9 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NPC1L1Q9UHC9 BNIP3P38-201ENST00000601117 544 ntBASIC4.68□□□□□ -1.66
NPC1L1Q9UHC9 AL355365.1-201ENST00000616480 294 ntBASIC4.68□□□□□ -1.66
NPC1L1Q9UHC9 MIR3651-201ENST00000630427 90 ntBASIC4.68□□□□□ -1.66
NPC1L1Q9UHC9 AC017002.4-201ENST00000604721 1525 ntBASIC4.68□□□□□ -1.66
NPC1L1Q9UHC9 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
NPC1L1Q9UHC9 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPC1L1Q9UHC9 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.68□□□□□ -1.66
NPC1L1Q9UHC9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NPC1L1Q9UHC9 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.68□□□□□ -1.66
NPC1L1Q9UHC9 RNA5SP267-201ENST00000364893 126 ntBASIC4.67□□□□□ -1.66
NPC1L1Q9UHC9 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.67□□□□□ -1.66
NPC1L1Q9UHC9 DPY19L1P2-201ENST00000426647 915 ntBASIC4.67□□□□□ -1.66
NPC1L1Q9UHC9 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.67□□□□□ -1.66
NPC1L1Q9UHC9 AL365396.1-201ENST00000430854 671 ntBASIC4.67□□□□□ -1.66
NPC1L1Q9UHC9 AL353898.1-201ENST00000444055 238 ntBASIC4.67□□□□□ -1.66
NPC1L1Q9UHC9 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.67□□□□□ -1.66
NPC1L1Q9UHC9 IGKV2-26-201ENST00000518305 343 ntBASIC4.67□□□□□ -1.66
NPC1L1Q9UHC9 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NPC1L1Q9UHC9 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.67□□□□□ -1.66
NPC1L1Q9UHC9 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.67□□□□□ -1.66
NPC1L1Q9UHC9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.67□□□□□ -1.66
NPC1L1Q9UHC9 AC243654.2-201ENST00000612843 443 ntBASIC4.67□□□□□ -1.66
NPC1L1Q9UHC9 AC116447.1-201ENST00000613153 453 ntBASIC4.67□□□□□ -1.66
NPC1L1Q9UHC9 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.67□□□□□ -1.66
NPC1L1Q9UHC9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPC1L1Q9UHC9 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.67□□□□□ -1.66
NPC1L1Q9UHC9 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
NPC1L1Q9UHC9 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.67□□□□□ -1.66
NPC1L1Q9UHC9 AC019155.1-201ENST00000382242 574 ntBASIC4.66□□□□□ -1.66
NPC1L1Q9UHC9 AL136116.1-201ENST00000403591 381 ntBASIC4.66□□□□□ -1.66
NPC1L1Q9UHC9 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.66□□□□□ -1.66
NPC1L1Q9UHC9 AC005019.1-201ENST00000436455 431 ntBASIC4.66□□□□□ -1.66
NPC1L1Q9UHC9 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.66□□□□□ -1.66
NPC1L1Q9UHC9 BX510359.1-201ENST00000456973 237 ntBASIC4.66□□□□□ -1.66
NPC1L1Q9UHC9 AC112198.1-201ENST00000505369 1220 ntBASIC4.66□□□□□ -1.66
NPC1L1Q9UHC9 AC093770.1-201ENST00000511559 571 ntBASIC4.66□□□□□ -1.66
NPC1L1Q9UHC9 AC108120.2-201ENST00000512973 294 ntBASIC4.66□□□□□ -1.66
NPC1L1Q9UHC9 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.66□□□□□ -1.66
NPC1L1Q9UHC9 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.66□□□□□ -1.66
NPC1L1Q9UHC9 MIR4644-201ENST00000579929 84 ntBASIC4.66□□□□□ -1.66
NPC1L1Q9UHC9 MIR4298-201ENST00000584380 73 ntBASIC4.66□□□□□ -1.66
NPC1L1Q9UHC9 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.66□□□□□ -1.66
NPC1L1Q9UHC9 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.66□□□□□ -1.66
NPC1L1Q9UHC9 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.66□□□□□ -1.66
NPC1L1Q9UHC9 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPC1L1Q9UHC9 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms