Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RFT1Q96AA3 FAM35DP-201ENST00000323387 2712 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RFT1Q96AA3 SNORA72.3-201ENST00000365074 132 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 RNU6-356P-201ENST00000384140 107 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 ZNF602P-201ENST00000405929 924 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 SNORA3C-201ENST00000408792 125 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 AC069218.2-201ENST00000411665 344 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 MTND4P22-201ENST00000413116 1169 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 FCF1P2-201ENST00000415284 583 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 PTP4A1P5-201ENST00000420305 455 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 MTCO2P17-201ENST00000424336 677 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 OSTCP5-201ENST00000425293 453 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 AC096632.1-201ENST00000427395 310 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 AC017083.1-201ENST00000428093 483 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 RPL12P3-201ENST00000440080 396 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 TPTE2P3-201ENST00000441562 1189 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 RPL9P32-201ENST00000464118 620 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 AC104164.3-201ENST00000467363 1258 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 RN7SL329P-201ENST00000467740 299 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 AC079203.1-201ENST00000487972 404 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 AC108145.1-201ENST00000503770 153 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 NDUFA5P12-201ENST00000503796 343 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 AC008802.1-201ENST00000519121 791 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 AC021451.1-201ENST00000523498 1129 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RFT1Q96AA3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 PCNPP1-201ENST00000552501 511 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 AC016180.1-201ENST00000567945 403 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 AGGF1P6-201ENST00000569213 976 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 CLIC4P2-201ENST00000601934 717 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 AL133243.1-201ENST00000614487 366 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 CYCSP41-201ENST00000616920 296 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 AC098679.5-201ENST00000624394 571 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 OR1S1-201ENST00000624470 978 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 AL512506.2-201ENST00000624472 458 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 AC008993.2-201ENST00000631744 806 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 MAPK10-372ENST00000641954 3413 ntBASIC3.78□□□□□ -1.8
RFT1Q96AA3 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RFT1Q96AA3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.78□□□□□ -1.8
RFT1Q96AA3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RFT1Q96AA3 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
RFT1Q96AA3 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.78□□□□□ -1.81
RFT1Q96AA3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RFT1Q96AA3 MTND4P10-201ENST00000446199 1363 ntBASIC3.77□□□□□ -1.81
RFT1Q96AA3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RFT1Q96AA3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.77□□□□□ -1.81
RFT1Q96AA3 MTCO1P24-201ENST00000515438 1558 ntBASIC3.77□□□□□ -1.81
RFT1Q96AA3 DCAF13P1-201ENST00000495256 1330 ntBASIC3.77□□□□□ -1.81
RFT1Q96AA3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RFT1Q96AA3 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RFT1Q96AA3 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RFT1Q96AA3 OR4A15-201ENST00000314706 1035 ntBASIC3.77□□□□□ -1.81
RFT1Q96AA3 RNU6-224P-201ENST00000384055 107 ntBASIC3.77□□□□□ -1.81
RFT1Q96AA3 RNU6-1226P-201ENST00000384317 107 ntBASIC3.77□□□□□ -1.81
RFT1Q96AA3 MIR649-201ENST00000384843 97 ntBASIC3.77□□□□□ -1.81
RFT1Q96AA3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.77□□□□□ -1.81
RFT1Q96AA3 AC073264.1-201ENST00000411508 416 ntBASIC3.77□□□□□ -1.81
RFT1Q96AA3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.77□□□□□ -1.81
RFT1Q96AA3 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.77□□□□□ -1.81
RFT1Q96AA3 OR51AB1P-201ENST00000429046 620 ntBASIC3.77□□□□□ -1.81
RFT1Q96AA3 PSMA2P3-201ENST00000429685 675 ntBASIC3.77□□□□□ -1.81
RFT1Q96AA3 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.77□□□□□ -1.81
RFT1Q96AA3 AF228730.2-201ENST00000438784 848 ntBASIC3.77□□□□□ -1.81
RFT1Q96AA3 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.77□□□□□ -1.81
RFT1Q96AA3 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.77□□□□□ -1.81
RFT1Q96AA3 AC009963.2-201ENST00000453431 138 ntBASIC3.77□□□□□ -1.81
RFT1Q96AA3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.77□□□□□ -1.81
RFT1Q96AA3 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.77□□□□□ -1.81
RFT1Q96AA3 AC069528.1-202ENST00000482888 637 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms