Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AP001636.2-201ENST00000525517 696 ntBASIC3.13□□□□□ -1.91
SRP9P49458 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.13□□□□□ -1.91
SRP9P49458 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.13□□□□□ -1.91
SRP9P49458 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.13□□□□□ -1.91
SRP9P49458 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.13□□□□□ -1.91
SRP9P49458 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.13□□□□□ -1.91
SRP9P49458 AC121761.2-201ENST00000617300 689 ntBASIC3.13□□□□□ -1.91
SRP9P49458 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.13□□□□□ -1.91
SRP9P49458 AC068647.1-201ENST00000489539 2265 ntBASIC3.13□□□□□ -1.91
SRP9P49458 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SRP9P49458 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SRP9P49458 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.12□□□□□ -1.91
SRP9P49458 AC058791.1-201ENST00000608412 3198 ntBASIC3.12□□□□□ -1.91
SRP9P49458 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SRP9P49458 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SRP9P49458 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.12□□□□□ -1.91
SRP9P49458 RNU1-75P-201ENST00000347264 129 ntBASIC3.12□□□□□ -1.91
SRP9P49458 AL359837.1-201ENST00000381357 287 ntBASIC3.12□□□□□ -1.91
SRP9P49458 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.12□□□□□ -1.91
SRP9P49458 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.12□□□□□ -1.91
SRP9P49458 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.12□□□□□ -1.91
SRP9P49458 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.12□□□□□ -1.91
SRP9P49458 GLRXP1-201ENST00000423261 334 ntBASIC3.12□□□□□ -1.91
SRP9P49458 OR4F13P-201ENST00000428478 931 ntBASIC3.12□□□□□ -1.91
SRP9P49458 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.12□□□□□ -1.91
SRP9P49458 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.12□□□□□ -1.91
SRP9P49458 AL645931.1-201ENST00000439737 410 ntBASIC3.12□□□□□ -1.91
SRP9P49458 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.12□□□□□ -1.91
SRP9P49458 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.12□□□□□ -1.91
SRP9P49458 UBDP1-202ENST00000457888 382 ntBASIC3.12□□□□□ -1.91
SRP9P49458 AC020898.1-201ENST00000474167 787 ntBASIC3.12□□□□□ -1.91
SRP9P49458 RPL21P103-201ENST00000479921 488 ntBASIC3.12□□□□□ -1.91
SRP9P49458 ACTR3P3-201ENST00000480448 893 ntBASIC3.12□□□□□ -1.91
SRP9P49458 AC078918.1-201ENST00000498515 228 ntBASIC3.12□□□□□ -1.91
SRP9P49458 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SRP9P49458 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.12□□□□□ -1.91
SRP9P49458 RN7SKP18-201ENST00000516005 275 ntBASIC3.12□□□□□ -1.91
SRP9P49458 MIR2276-201ENST00000516886 89 ntBASIC3.12□□□□□ -1.91
SRP9P49458 AC023632.4-201ENST00000517783 191 ntBASIC3.12□□□□□ -1.91
SRP9P49458 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC3.12□□□□□ -1.91
SRP9P49458 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.12□□□□□ -1.91
SRP9P49458 AC023161.2-201ENST00000551218 780 ntBASIC3.12□□□□□ -1.91
SRP9P49458 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.12□□□□□ -1.91
SRP9P49458 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.12□□□□□ -1.91
SRP9P49458 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.12□□□□□ -1.91
SRP9P49458 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.12□□□□□ -1.91
SRP9P49458 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.12□□□□□ -1.91
SRP9P49458 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.12□□□□□ -1.91
SRP9P49458 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.12□□□□□ -1.91
SRP9P49458 AC022149.2-201ENST00000621061 203 ntBASIC3.12□□□□□ -1.91
SRP9P49458 AC010809.3-201ENST00000621310 641 ntBASIC3.12□□□□□ -1.91
SRP9P49458 AP003072.4-201ENST00000624580 310 ntBASIC3.12□□□□□ -1.91
SRP9P49458 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.12□□□□□ -1.91
SRP9P49458 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SRP9P49458 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SRP9P49458 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.11□□□□□ -1.91
SRP9P49458 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SRP9P49458 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.11□□□□□ -1.91
SRP9P49458 AL079305.1-201ENST00000623159 3008 ntBASIC3.11□□□□□ -1.91
SRP9P49458 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SRP9P49458 SNORA62.3-201ENST00000365110 153 ntBASIC3.11□□□□□ -1.91
SRP9P49458 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SRP9P49458 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.11□□□□□ -1.91
SRP9P49458 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
SRP9P49458 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.11□□□□□ -1.91
SRP9P49458 MTND4P22-201ENST00000413116 1169 ntBASIC3.11□□□□□ -1.91
SRP9P49458 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.11□□□□□ -1.91
SRP9P49458 AL035423.1-201ENST00000420331 213 ntBASIC3.11□□□□□ -1.91
SRP9P49458 AL445584.1-201ENST00000431451 330 ntBASIC3.11□□□□□ -1.91
SRP9P49458 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.11□□□□□ -1.91
SRP9P49458 AL662791.1-201ENST00000441992 928 ntBASIC3.11□□□□□ -1.91
SRP9P49458 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.11□□□□□ -1.91
SRP9P49458 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.11□□□□□ -1.91
SRP9P49458 AL672167.3-201ENST00000465951 960 ntBASIC3.11□□□□□ -1.91
SRP9P49458 FTH1P2-201ENST00000466086 412 ntBASIC3.11□□□□□ -1.91
SRP9P49458 TXNP6-201ENST00000510190 310 ntBASIC3.11□□□□□ -1.91
SRP9P49458 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.11□□□□□ -1.91
SRP9P49458 SNORA26.10-201ENST00000516427 141 ntBASIC3.11□□□□□ -1.91
SRP9P49458 AP000926.4-201ENST00000527351 454 ntBASIC3.11□□□□□ -1.91
SRP9P49458 MED28P5-201ENST00000528254 438 ntBASIC3.11□□□□□ -1.91
SRP9P49458 AC006518.1-201ENST00000541449 943 ntBASIC3.11□□□□□ -1.91
SRP9P49458 AC037471.2-201ENST00000564941 598 ntBASIC3.11□□□□□ -1.91
SRP9P49458 AC006130.2-201ENST00000586202 326 ntBASIC3.11□□□□□ -1.91
SRP9P49458 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.11□□□□□ -1.91
SRP9P49458 RNU1-30P-201ENST00000606575 163 ntBASIC3.11□□□□□ -1.91
SRP9P49458 AC107294.3-201ENST00000609211 526 ntBASIC3.11□□□□□ -1.91
SRP9P49458 AL732618.1-201ENST00000623251 301 ntBASIC3.11□□□□□ -1.91
SRP9P49458 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
SRP9P49458 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SRP9P49458 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.11□□□□□ -1.91
SRP9P49458 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SRP9P49458 MTND5P27-201ENST00000428871 1720 ntBASIC3.1□□□□□ -1.91
SRP9P49458 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.1□□□□□ -1.91
SRP9P49458 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SRP9P49458 AL353746.1-201ENST00000566293 6881 ntBASIC3.1□□□□□ -1.91
SRP9P49458 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.1□□□□□ -1.91
SRP9P49458 U8.11-201ENST00000384699 133 ntBASIC3.1□□□□□ -1.91
SRP9P49458 U8.12-201ENST00000384701 133 ntBASIC3.1□□□□□ -1.91
SRP9P49458 SOD2P1-201ENST00000396543 562 ntBASIC3.1□□□□□ -1.91
SRP9P49458 RPL21P17-201ENST00000397467 475 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms