Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RNF10P1-201ENST00000418589 369 ntBASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 SDCBPP2-201ENST00000424643 885 ntBASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 SDCBPP1-201ENST00000440192 890 ntBASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 RPL21P133-201ENST00000443666 476 ntBASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 RGS5-217ENST00000451759 835 ntTSL 3 BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 AZGP1P2-201ENST00000454506 345 ntBASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 Z92846.1-201ENST00000456203 268 ntBASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 snoU109.1-201ENST00000459339 135 ntBASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 SRP72-202ENST00000504757 745 ntTSL 2 BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 snoU109.5-201ENST00000516231 132 ntBASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 RN7SKP96-201ENST00000516948 297 ntBASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 AC107954.1-201ENST00000565906 727 ntBASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 AC011447.4-201ENST00000587562 111 ntBASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 BNIP3P8-201ENST00000597863 560 ntBASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 BNIP3P23-201ENST00000599655 511 ntBASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 MTCO1P9-201ENST00000505577 1534 ntBASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 GDI2P1-201ENST00000429312 1336 ntBASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
CSB-PGBD3P0DP91 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 PANDAR-201ENST00000629595 1506 ntBASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 OR4A15-201ENST00000314706 1035 ntBASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 RN7SKP104-201ENST00000362605 328 ntBASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 Y_RNA.86-201ENST00000363020 111 ntBASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 RNU6-738P-201ENST00000384531 106 ntBASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 MIR141-201ENST00000384975 95 ntBASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 U8.14-201ENST00000390843 143 ntBASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 AC016397.1-201ENST00000412463 242 ntBASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 ZNF90P2-204ENST00000419323 1075 ntBASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 B3GALNT1P1-201ENST00000420569 975 ntBASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 CASC19-203ENST00000523510 575 ntTSL 3 BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 AP000790.1-201ENST00000528891 737 ntBASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 AC068587.4-201ENST00000533893 186 ntBASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 AC137627.1-201ENST00000545761 289 ntBASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 AL389895.1-201ENST00000554127 252 ntBASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 AC025678.1-201ENST00000567861 338 ntBASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 AC112187.2-201ENST00000604345 283 ntBASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 AC007363.1-201ENST00000604736 620 ntBASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 RNU6ATAC35P-201ENST00000609276 444 ntBASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 EIF3FP1-201ENST00000613970 806 ntBASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 PACRG-211ENST00000621363 360 ntTSL 5 BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 AC005225.5-201ENST00000623547 2225 ntBASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CSB-PGBD3P0DP91 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 MIR92A2-201ENST00000385299 75 ntBASIC7.18□□□□□ -1.26
CSB-PGBD3P0DP91 U3.23-201ENST00000391132 200 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms