Protein–RNA interactions for Protein: P31274

HOXC9, Homeobox protein Hox-C9, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9P31274 MED6P1-201ENST00000439659 713 ntBASIC4.91□□□□□ -1.62
HOXC9P31274 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.91□□□□□ -1.62
HOXC9P31274 RPS17P11-201ENST00000474297 293 ntBASIC4.91□□□□□ -1.62
HOXC9P31274 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.91□□□□□ -1.62
HOXC9P31274 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC9P31274 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC9P31274 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.91□□□□□ -1.62
HOXC9P31274 MIR5195-201ENST00000583555 115 ntBASIC4.91□□□□□ -1.62
HOXC9P31274 AC096947.1-201ENST00000603233 470 ntBASIC4.91□□□□□ -1.62
HOXC9P31274 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXC9P31274 AC027449.1-201ENST00000608890 407 ntBASIC4.91□□□□□ -1.62
HOXC9P31274 AC093875.1-201ENST00000623688 504 ntBASIC4.91□□□□□ -1.62
HOXC9P31274 AC126544.2-201ENST00000625174 749 ntBASIC4.91□□□□□ -1.62
HOXC9P31274 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXC9P31274 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC9P31274 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXC9P31274 AL645568.2-201ENST00000432815 1337 ntBASIC4.91□□□□□ -1.62
HOXC9P31274 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC9P31274 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC9P31274 IPO8P1-201ENST00000455509 3109 ntBASIC4.9□□□□□ -1.62
HOXC9P31274 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HOXC9P31274 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.9□□□□□ -1.62
HOXC9P31274 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.9□□□□□ -1.62
HOXC9P31274 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
HOXC9P31274 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.9□□□□□ -1.62
HOXC9P31274 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HOXC9P31274 AC007685.1-201ENST00000329806 452 ntBASIC4.9□□□□□ -1.63
HOXC9P31274 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC9P31274 MTATP6P31-201ENST00000406985 692 ntBASIC4.9□□□□□ -1.63
HOXC9P31274 AC105402.1-201ENST00000413336 545 ntBASIC4.9□□□□□ -1.63
HOXC9P31274 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.9□□□□□ -1.63
HOXC9P31274 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.9□□□□□ -1.63
HOXC9P31274 FABP5P3-201ENST00000437960 408 ntBASIC4.9□□□□□ -1.63
HOXC9P31274 TPTE2P3-201ENST00000441562 1189 ntBASIC4.9□□□□□ -1.63
HOXC9P31274 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.9□□□□□ -1.63
HOXC9P31274 AL133244.1-201ENST00000456007 258 ntBASIC4.9□□□□□ -1.63
HOXC9P31274 RPL23AP12-201ENST00000467573 473 ntBASIC4.9□□□□□ -1.63
HOXC9P31274 RNU6-1004P-201ENST00000516584 111 ntBASIC4.9□□□□□ -1.63
HOXC9P31274 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC9P31274 AC103843.2-201ENST00000530523 682 ntBASIC4.9□□□□□ -1.63
HOXC9P31274 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.9□□□□□ -1.63
HOXC9P31274 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC9P31274 AL109741.3-201ENST00000561748 592 ntBASIC4.9□□□□□ -1.63
HOXC9P31274 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC9P31274 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC9P31274 AC079610.2-201ENST00000604818 690 ntBASIC4.9□□□□□ -1.63
HOXC9P31274 AC124016.2-201ENST00000610058 665 ntBASIC4.9□□□□□ -1.63
HOXC9P31274 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.9□□□□□ -1.63
HOXC9P31274 AC090772.4-201ENST00000623599 362 ntBASIC4.9□□□□□ -1.63
HOXC9P31274 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.9□□□□□ -1.63
HOXC9P31274 AC132825.7-201ENST00000638744 335 ntBASIC4.9□□□□□ -1.63
HOXC9P31274 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC9P31274 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC9P31274 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC9P31274 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
HOXC9P31274 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
HOXC9P31274 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC9P31274 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC9P31274 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.9□□□□□ -1.63
HOXC9P31274 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC9P31274 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC9P31274 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC9P31274 AC090337.1-201ENST00000579651 2074 ntBASIC4.89□□□□□ -1.63
HOXC9P31274 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HOXC9P31274 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HOXC9P31274 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC9P31274 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC9P31274 RNU6-207P-201ENST00000384137 107 ntBASIC4.89□□□□□ -1.63
HOXC9P31274 RNU4-31P-201ENST00000384211 141 ntBASIC4.89□□□□□ -1.63
HOXC9P31274 MIR320B1-201ENST00000390209 79 ntBASIC4.89□□□□□ -1.63
HOXC9P31274 AC096533.1-201ENST00000411645 353 ntBASIC4.89□□□□□ -1.63
HOXC9P31274 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.89□□□□□ -1.63
HOXC9P31274 DBIP2-201ENST00000419076 262 ntBASIC4.89□□□□□ -1.63
HOXC9P31274 AL158156.1-201ENST00000422509 473 ntBASIC4.89□□□□□ -1.63
HOXC9P31274 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXC9P31274 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC9P31274 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.89□□□□□ -1.63
HOXC9P31274 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC9P31274 RPL34P26-201ENST00000445636 354 ntBASIC4.89□□□□□ -1.63
HOXC9P31274 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC9P31274 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC9P31274 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXC9P31274 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXC9P31274 AC026427.2-201ENST00000506228 536 ntBASIC4.89□□□□□ -1.63
HOXC9P31274 SUMO2P5-201ENST00000506790 245 ntBASIC4.89□□□□□ -1.63
HOXC9P31274 NPM1P35-201ENST00000533043 868 ntBASIC4.89□□□□□ -1.63
HOXC9P31274 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.89□□□□□ -1.63
HOXC9P31274 AP003717.3-201ENST00000544832 1180 ntBASIC4.89□□□□□ -1.63
HOXC9P31274 AC017076.1-201ENST00000607613 578 ntBASIC4.89□□□□□ -1.63
HOXC9P31274 RNU6-1192P-201ENST00000612197 107 ntBASIC4.89□□□□□ -1.63
HOXC9P31274 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC9P31274 AC011472.4-201ENST00000615848 491 ntBASIC4.89□□□□□ -1.63
HOXC9P31274 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC9P31274 BNIP3P41-202ENST00000616656 861 ntBASIC4.89□□□□□ -1.63
HOXC9P31274 RNU6-489P-201ENST00000618289 107 ntBASIC4.89□□□□□ -1.63
HOXC9P31274 AP003485.1-201ENST00000625093 753 ntBASIC4.89□□□□□ -1.63
HOXC9P31274 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
HOXC9P31274 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC9P31274 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC9P31274 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms