Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCL3L1P16619 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCL3L1P16619 AC024341.1-201ENST00000526444 1552 ntBASIC2.67□□□□□ -1.98
CCL3L1P16619 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC2.67□□□□□ -1.98
CCL3L1P16619 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC2.67□□□□□ -1.98
CCL3L1P16619 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCL3L1P16619 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CCL3L1P16619 MIR34B-201ENST00000385076 84 ntBASIC2.67□□□□□ -1.98
CCL3L1P16619 TAF9BP1-201ENST00000396646 746 ntBASIC2.67□□□□□ -1.98
CCL3L1P16619 RNA5SP229-201ENST00000410809 99 ntBASIC2.67□□□□□ -1.98
CCL3L1P16619 AC013268.2-201ENST00000420753 337 ntBASIC2.67□□□□□ -1.98
CCL3L1P16619 AL158156.1-201ENST00000422509 473 ntBASIC2.67□□□□□ -1.98
CCL3L1P16619 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.67□□□□□ -1.98
CCL3L1P16619 AL591503.2-201ENST00000442314 1005 ntBASIC2.67□□□□□ -1.98
CCL3L1P16619 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CCL3L1P16619 AC243772.1-201ENST00000451620 410 ntBASIC2.67□□□□□ -1.98
CCL3L1P16619 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC2.67□□□□□ -1.98
CCL3L1P16619 AL133244.1-201ENST00000456007 258 ntBASIC2.67□□□□□ -1.98
CCL3L1P16619 BTF3P5-201ENST00000457252 467 ntBASIC2.67□□□□□ -1.98
CCL3L1P16619 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC2.67□□□□□ -1.98
CCL3L1P16619 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC2.67□□□□□ -1.98
CCL3L1P16619 RN7SL601P-201ENST00000471221 293 ntBASIC2.67□□□□□ -1.98
CCL3L1P16619 RPS4XP22-201ENST00000480755 780 ntBASIC2.67□□□□□ -1.98
CCL3L1P16619 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.67□□□□□ -1.98
CCL3L1P16619 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.67□□□□□ -1.98
CCL3L1P16619 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.67□□□□□ -1.98
CCL3L1P16619 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CCL3L1P16619 AC068446.3-201ENST00000555285 382 ntBASIC2.67□□□□□ -1.98
CCL3L1P16619 MIR3944-201ENST00000581277 108 ntBASIC2.67□□□□□ -1.98
CCL3L1P16619 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC2.67□□□□□ -1.98
CCL3L1P16619 AL159169.3-201ENST00000608871 561 ntBASIC2.67□□□□□ -1.98
CCL3L1P16619 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.67□□□□□ -1.98
CCL3L1P16619 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCL3L1P16619 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CCL3L1P16619 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
CCL3L1P16619 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCL3L1P16619 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.66□□□□□ -1.98
CCL3L1P16619 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCL3L1P16619 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.66□□□□□ -1.98
CCL3L1P16619 AC093719.1-202ENST00000392735 373 ntBASIC2.66□□□□□ -1.98
CCL3L1P16619 RNA5SP120-201ENST00000410900 112 ntBASIC2.66□□□□□ -1.98
CCL3L1P16619 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC2.66□□□□□ -1.98
CCL3L1P16619 TRGV7-201ENST00000427089 353 ntBASIC2.66□□□□□ -1.98
CCL3L1P16619 RPS6P12-201ENST00000432491 726 ntBASIC2.66□□□□□ -1.98
CCL3L1P16619 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC2.66□□□□□ -1.98
CCL3L1P16619 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC2.66□□□□□ -1.98
CCL3L1P16619 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC2.66□□□□□ -1.98
CCL3L1P16619 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.66□□□□□ -1.98
CCL3L1P16619 Z75741.1-201ENST00000446793 314 ntBASIC2.66□□□□□ -1.98
CCL3L1P16619 Z99127.3-201ENST00000448158 395 ntBASIC2.66□□□□□ -1.98
CCL3L1P16619 AC115115.1-201ENST00000449927 248 ntBASIC2.66□□□□□ -1.98
CCL3L1P16619 AC239809.1-201ENST00000450470 217 ntBASIC2.66□□□□□ -1.98
CCL3L1P16619 AC087312.1-201ENST00000471411 480 ntBASIC2.66□□□□□ -1.98
CCL3L1P16619 PRELID3BP7-201ENST00000503606 469 ntBASIC2.66□□□□□ -1.98
CCL3L1P16619 AC110794.1-201ENST00000505816 425 ntBASIC2.66□□□□□ -1.98
CCL3L1P16619 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC2.66□□□□□ -1.98
CCL3L1P16619 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CCL3L1P16619 AC135001.1-201ENST00000544546 283 ntBASIC2.66□□□□□ -1.98
CCL3L1P16619 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.66□□□□□ -1.98
CCL3L1P16619 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC2.66□□□□□ -1.98
CCL3L1P16619 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.66□□□□□ -1.98
CCL3L1P16619 BNIP3P33-201ENST00000598912 569 ntBASIC2.66□□□□□ -1.98
CCL3L1P16619 AL606834.2-201ENST00000602954 668 ntBASIC2.66□□□□□ -1.98
CCL3L1P16619 AC012468.1-201ENST00000604888 430 ntBASIC2.66□□□□□ -1.98
CCL3L1P16619 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.66□□□□□ -1.98
CCL3L1P16619 U7.8-201ENST00000619968 63 ntBASIC2.66□□□□□ -1.98
CCL3L1P16619 AC091903.1-201ENST00000624322 454 ntBASIC2.66□□□□□ -1.98
CCL3L1P16619 MIR6715B-201ENST00000637172 77 ntBASIC2.66□□□□□ -1.98
CCL3L1P16619 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCL3L1P16619 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCL3L1P16619 AC058791.1-201ENST00000608412 3198 ntBASIC2.66□□□□□ -1.98
CCL3L1P16619 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CCL3L1P16619 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
CCL3L1P16619 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC2.66□□□□□ -1.98
CCL3L1P16619 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
CCL3L1P16619 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.66□□□□□ -1.98
CCL3L1P16619 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.98
CCL3L1P16619 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC2.65□□□□□ -1.98
CCL3L1P16619 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.98
CCL3L1P16619 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CCL3L1P16619 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCL3L1P16619 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCL3L1P16619 Z73965.1-201ENST00000623412 2297 ntBASIC2.65□□□□□ -1.99
CCL3L1P16619 RNU1-75P-201ENST00000347264 129 ntBASIC2.65□□□□□ -1.99
CCL3L1P16619 RNU6-1279P-201ENST00000383917 103 ntBASIC2.65□□□□□ -1.99
CCL3L1P16619 RPL5P19-201ENST00000404228 893 ntBASIC2.65□□□□□ -1.99
CCL3L1P16619 AL136131.1-201ENST00000406079 803 ntBASIC2.65□□□□□ -1.99
CCL3L1P16619 RNA5SP107-201ENST00000411358 122 ntBASIC2.65□□□□□ -1.99
CCL3L1P16619 LINC01881-201ENST00000416103 412 ntBASIC2.65□□□□□ -1.99
CCL3L1P16619 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.65□□□□□ -1.99
CCL3L1P16619 MTCO1P51-201ENST00000427672 1060 ntBASIC2.65□□□□□ -1.99
CCL3L1P16619 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC2.65□□□□□ -1.99
CCL3L1P16619 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC2.65□□□□□ -1.99
CCL3L1P16619 NAP1L4P3-201ENST00000432820 1147 ntBASIC2.65□□□□□ -1.99
CCL3L1P16619 AC022431.1-201ENST00000450941 438 ntBASIC2.65□□□□□ -1.99
CCL3L1P16619 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.65□□□□□ -1.99
CCL3L1P16619 RPL32P34-201ENST00000486380 400 ntBASIC2.65□□□□□ -1.99
CCL3L1P16619 AL358832.1-201ENST00000497800 389 ntBASIC2.65□□□□□ -1.99
CCL3L1P16619 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.65□□□□□ -1.99
CCL3L1P16619 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms