Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC074050.1-201ENST00000563247 211 ntBASIC4.32□□□□□ -1.72
NEDD4P46934 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.32□□□□□ -1.72
NEDD4P46934 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.32□□□□□ -1.72
NEDD4P46934 BNIP3P27-201ENST00000599991 412 ntBASIC4.32□□□□□ -1.72
NEDD4P46934 AL163642.2-201ENST00000604722 1019 ntBASIC4.32□□□□□ -1.72
NEDD4P46934 AC112503.2-201ENST00000609005 552 ntBASIC4.32□□□□□ -1.72
NEDD4P46934 AC018645.2-201ENST00000609151 472 ntBASIC4.32□□□□□ -1.72
NEDD4P46934 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.32□□□□□ -1.72
NEDD4P46934 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NEDD4P46934 AC006133.1-201ENST00000617106 264 ntBASIC4.32□□□□□ -1.72
NEDD4P46934 AP004607.9-201ENST00000618202 316 ntBASIC4.32□□□□□ -1.72
NEDD4P46934 AC006840.1-201ENST00000623069 542 ntBASIC4.32□□□□□ -1.72
NEDD4P46934 AC024023.1-201ENST00000624530 922 ntBASIC4.32□□□□□ -1.72
NEDD4P46934 AC112200.1-201ENST00000625015 234 ntBASIC4.32□□□□□ -1.72
NEDD4P46934 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.32□□□□□ -1.72
NEDD4P46934 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.32□□□□□ -1.72
NEDD4P46934 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NEDD4P46934 AC008432.1-201ENST00000615912 1320 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 CYP1D1P-201ENST00000416662 1433 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NEDD4P46934 SAGE2P-201ENST00000420011 2126 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NEDD4P46934 MIR320B1-201ENST00000390209 79 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 RNU6-1176P-201ENST00000390955 107 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 UBE2V1P11-201ENST00000411559 285 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 DBIP2-201ENST00000419076 262 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 MTCO2P1-201ENST00000424648 477 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 AC002075.2-201ENST00000425207 252 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 GOT2P5-201ENST00000433995 546 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 SKP1P1-201ENST00000438081 489 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.31□□□□□ -1.72
NEDD4P46934 AL035551.1-201ENST00000446931 348 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 RPL7P55-201ENST00000450522 746 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 AC099560.2-201ENST00000457554 255 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 RPL32P14-201ENST00000463196 378 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 AC018635.1-201ENST00000468292 1030 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.31□□□□□ -1.72
NEDD4P46934 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
NEDD4P46934 SNORA31.13-201ENST00000516624 135 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 SNORA67.7-201ENST00000516664 135 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 AC018442.3-201ENST00000523025 183 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 AC008489.1-201ENST00000524271 483 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.31□□□□□ -1.72
NEDD4P46934 AC124283.4-201ENST00000581815 456 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 MIR3158-1-201ENST00000583596 81 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.31□□□□□ -1.72
NEDD4P46934 BNIP3P31-201ENST00000604515 566 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 AC079610.2-201ENST00000604818 690 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.31□□□□□ -1.72
NEDD4P46934 AC007342.8-201ENST00000623278 678 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 AC010872.1-201ENST00000624225 675 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
NEDD4P46934 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.31□□□□□ -1.72
NEDD4P46934 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NEDD4P46934 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NEDD4P46934 AL355596.1-201ENST00000565399 3996 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.31□□□□□ -1.72
NEDD4P46934 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NEDD4P46934 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.31□□□□□ -1.72
NEDD4P46934 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
NEDD4P46934 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.31□□□□□ -1.72
NEDD4P46934 AC007656.2-201ENST00000624902 4547 ntBASIC4.31□□□□□ -1.72
NEDD4P46934 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD4P46934 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD4P46934 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NEDD4P46934 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD4P46934 OR10J6P-201ENST00000289731 930 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 OR52B1P-201ENST00000316506 909 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NEDD4P46934 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD4P46934 SNORD9-201ENST00000362566 104 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 RNU6-283P-201ENST00000364788 107 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD4P46934 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.3□□□□□ -1.72
NEDD4P46934 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD4P46934 RNU6-185P-201ENST00000384421 107 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 RNU6-244P-201ENST00000391028 104 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD4P46934 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.3□□□□□ -1.72
NEDD4P46934 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.3□□□□□ -1.72
NEDD4P46934 AC245054.1-201ENST00000420944 258 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD4P46934 HSFY7P-201ENST00000432672 318 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 RPS26P40-201ENST00000435209 294 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD4P46934 HSFY8P-201ENST00000437934 318 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.3□□□□□ -1.72
NEDD4P46934 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.3□□□□□ -1.72
NEDD4P46934 Z95327.1-201ENST00000446082 482 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 RPS3AP46-201ENST00000448352 682 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 HMGB1P26-201ENST00000452520 628 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.3□□□□□ -1.72
NEDD4P46934 HSFY5P-201ENST00000453726 309 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 RPL23AP12-201ENST00000467573 473 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.3□□□□□ -1.72
NEDD4P46934 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.3□□□□□ -1.72
NEDD4P46934 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NEDD4P46934 NARSP2-201ENST00000518524 679 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 IGLVIV-53-201ENST00000520107 367 ntBASIC4.3□□□□□ -1.72
NEDD4P46934 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 244.1 ms