Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC073143.1-201ENST00000436316 395 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.76□□□□□ -1.81
NKX2-1P43699 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.76□□□□□ -1.81
NKX2-1P43699 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.76□□□□□ -1.81
NKX2-1P43699 CNOT7P2-201ENST00000441051 832 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 MTCO1P48-201ENST00000448024 1096 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 RPL29P29-201ENST00000448725 423 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 TPT1P13-201ENST00000449760 499 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC3.76□□□□□ -1.81
NKX2-1P43699 RPL21P134-201ENST00000453468 483 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC3.76□□□□□ -1.81
NKX2-1P43699 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.76□□□□□ -1.81
NKX2-1P43699 RPL37P6-202ENST00000464216 403 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 AC025445.1-201ENST00000502728 300 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 AC093534.1-201ENST00000504977 132 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.76□□□□□ -1.81
NKX2-1P43699 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.76□□□□□ -1.81
NKX2-1P43699 HIGD1AP14-201ENST00000507617 282 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NKX2-1P43699 AC006499.6-201ENST00000511169 607 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 AC008837.2-201ENST00000513076 418 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.76□□□□□ -1.81
NKX2-1P43699 RN7SKP31-201ENST00000516354 278 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.76□□□□□ -1.81
NKX2-1P43699 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC3.76□□□□□ -1.81
NKX2-1P43699 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
NKX2-1P43699 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC3.76□□□□□ -1.81
NKX2-1P43699 AP000926.4-201ENST00000527351 454 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 AP003461.1-201ENST00000528866 78 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.76□□□□□ -1.81
NKX2-1P43699 OR5BC1P-201ENST00000529327 739 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 OR4A45P-201ENST00000529954 901 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.76□□□□□ -1.81
NKX2-1P43699 OSBPL9P5-201ENST00000542581 171 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.76□□□□□ -1.81
NKX2-1P43699 AC091515.1-201ENST00000548110 679 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 AC069240.1-201ENST00000548774 375 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 AC133555.2-201ENST00000550213 292 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.76□□□□□ -1.81
NKX2-1P43699 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.76□□□□□ -1.81
NKX2-1P43699 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.76□□□□□ -1.81
NKX2-1P43699 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.76□□□□□ -1.81
NKX2-1P43699 AC008088.1-201ENST00000580993 280 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 AP001180.3-201ENST00000582221 145 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 SNORD39.3-201ENST00000584451 71 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC3.76□□□□□ -1.81
NKX2-1P43699 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC3.76□□□□□ -1.81
NKX2-1P43699 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.76□□□□□ -1.81
NKX2-1P43699 AC013444.2-201ENST00000603317 787 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 RNA5SP108-201ENST00000605921 117 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 AC091946.2-201ENST00000606105 291 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.76□□□□□ -1.81
NKX2-1P43699 AC007497.1-201ENST00000610421 561 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 AL627230.1-201ENST00000613077 211 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.76□□□□□ -1.81
NKX2-1P43699 AC091304.6-201ENST00000619761 202 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.76□□□□□ -1.81
NKX2-1P43699 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
NKX2-1P43699 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
NKX2-1P43699 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.76□□□□□ -1.81
NKX2-1P43699 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.76□□□□□ -1.81
NKX2-1P43699 MTCO1P24-201ENST00000515438 1558 ntBASIC3.76□□□□□ -1.81
NKX2-1P43699 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NKX2-1P43699 MTCO1P11-201ENST00000429111 1528 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 AC107982.1-201ENST00000507171 1300 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 LINC00561-201ENST00000565815 2738 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
NKX2-1P43699 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NKX2-1P43699 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.75□□□□□ -1.81
NKX2-1P43699 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
NKX2-1P43699 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
NKX2-1P43699 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NKX2-1P43699 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
NKX2-1P43699 KPNA2P2-201ENST00000419546 1489 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NKX2-1P43699 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NKX2-1P43699 OR5H2-201ENST00000355273 945 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
NKX2-1P43699 Y_RNA.25-201ENST00000362528 102 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
NKX2-1P43699 RNU1-82P-201ENST00000390851 165 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 AC092642.1-201ENST00000392417 425 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 AL356131.1-201ENST00000405826 414 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.75□□□□□ -1.81
NKX2-1P43699 RNA5SP80-201ENST00000410475 111 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 RNA5SP104-201ENST00000410989 118 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 AC073264.1-201ENST00000411508 416 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 RAP1BP1-201ENST00000412709 553 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.75□□□□□ -1.81
NKX2-1P43699 AL606662.1-201ENST00000445763 553 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 OR6K5P-201ENST00000447050 945 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.75□□□□□ -1.81
NKX2-1P43699 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.75□□□□□ -1.81
NKX2-1P43699 PPIAP3-201ENST00000450588 505 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.75□□□□□ -1.81
NKX2-1P43699 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
NKX2-1P43699 NDUFA5P9-201ENST00000472609 340 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 AC105185.1-201ENST00000518705 535 ntBASIC3.75□□□□□ -1.81
NKX2-1P43699 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.75□□□□□ -1.81
NKX2-1P43699 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms