Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
PdfS4R2K0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
PdfS4R2K0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PdfS4R2K0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
PdfS4R2K0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
PdfS4R2K0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
PdfS4R2K0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
PdfS4R2K0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
PdfS4R2K0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
PdfS4R2K0 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
PdfS4R2K0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.68□□□□□ -0.38
PdfS4R2K0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
PdfS4R2K0 Gm22240-201ENSMUST00000175225 82 ntBASIC12.68□□□□□ -0.38
PdfS4R2K0 Trmt13-210ENSMUST00000198454 880 ntBASIC12.68□□□□□ -0.38
PdfS4R2K0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
PdfS4R2K0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
PdfS4R2K0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
PdfS4R2K0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
PdfS4R2K0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
PdfS4R2K0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
PdfS4R2K0 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.68□□□□□ -0.38
PdfS4R2K0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
PdfS4R2K0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdfS4R2K0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
PdfS4R2K0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdfS4R2K0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
PdfS4R2K0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdfS4R2K0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdfS4R2K0 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdfS4R2K0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.67□□□□□ -0.38
PdfS4R2K0 Gm10653-202ENSMUST00000139570 835 ntBASIC12.67□□□□□ -0.38
PdfS4R2K0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdfS4R2K0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdfS4R2K0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdfS4R2K0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
PdfS4R2K0 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.67□□□□□ -0.38
PdfS4R2K0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdfS4R2K0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdfS4R2K0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
PdfS4R2K0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
PdfS4R2K0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdfS4R2K0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdfS4R2K0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.67□□□□□ -0.38
PdfS4R2K0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.67□□□□□ -0.38
PdfS4R2K0 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
PdfS4R2K0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
PdfS4R2K0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PdfS4R2K0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PdfS4R2K0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.66□□□□□ -0.38
PdfS4R2K0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
PdfS4R2K0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.66□□□□□ -0.38
PdfS4R2K0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
PdfS4R2K0 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PdfS4R2K0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
PdfS4R2K0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PdfS4R2K0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PdfS4R2K0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PdfS4R2K0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
PdfS4R2K0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PdfS4R2K0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PdfS4R2K0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PdfS4R2K0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
PdfS4R2K0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PdfS4R2K0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PdfS4R2K0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
PdfS4R2K0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PdfS4R2K0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
PdfS4R2K0 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
PdfS4R2K0 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.66□□□□□ -0.38
PdfS4R2K0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
PdfS4R2K0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
PdfS4R2K0 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms