Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Gm11336-201ENSMUST00000118168 334 ntBASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Gm26039-201ENSMUST00000158152 144 ntBASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb2S4R1M3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb2S4R1M3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.49■□□□□ 0.23
H2afb2S4R1M3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb2S4R1M3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb2S4R1M3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb2S4R1M3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb2S4R1M3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb2S4R1M3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb2S4R1M3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.49■□□□□ 0.23
H2afb2S4R1M3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
H2afb2S4R1M3 Gm18421-201ENSMUST00000204122 625 ntBASIC16.49■□□□□ 0.23
H2afb2S4R1M3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb2S4R1M3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.49■□□□□ 0.23
H2afb2S4R1M3 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.49■□□□□ 0.23
H2afb2S4R1M3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
H2afb2S4R1M3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
H2afb2S4R1M3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb2S4R1M3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb2S4R1M3 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.49■□□□□ 0.23
H2afb2S4R1M3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
H2afb2S4R1M3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
H2afb2S4R1M3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb2S4R1M3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.48■□□□□ 0.23
H2afb2S4R1M3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb2S4R1M3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb2S4R1M3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb2S4R1M3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.47■□□□□ 0.23
H2afb2S4R1M3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb2S4R1M3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb2S4R1M3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb2S4R1M3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
H2afb2S4R1M3 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.47■□□□□ 0.23
H2afb2S4R1M3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb2S4R1M3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms