Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.89■□□□□ 0.45
Nr1h3Q9Z0Y9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1h3Q9Z0Y9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Nr1h3Q9Z0Y9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1h3Q9Z0Y9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nr1h3Q9Z0Y9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1h3Q9Z0Y9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1h3Q9Z0Y9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1h3Q9Z0Y9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1h3Q9Z0Y9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1h3Q9Z0Y9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nr1h3Q9Z0Y9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1h3Q9Z0Y9 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1h3Q9Z0Y9 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1h3Q9Z0Y9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1h3Q9Z0Y9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1h3Q9Z0Y9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1h3Q9Z0Y9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1h3Q9Z0Y9 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nr1h3Q9Z0Y9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nr1h3Q9Z0Y9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1h3Q9Z0Y9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1h3Q9Z0Y9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1h3Q9Z0Y9 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.87■□□□□ 0.45
Nr1h3Q9Z0Y9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.87■□□□□ 0.45
Nr1h3Q9Z0Y9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.87■□□□□ 0.45
Nr1h3Q9Z0Y9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1h3Q9Z0Y9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1h3Q9Z0Y9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1h3Q9Z0Y9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1h3Q9Z0Y9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1h3Q9Z0Y9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1h3Q9Z0Y9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1h3Q9Z0Y9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1h3Q9Z0Y9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1h3Q9Z0Y9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1h3Q9Z0Y9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1h3Q9Z0Y9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nr1h3Q9Z0Y9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1h3Q9Z0Y9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Nr1h3Q9Z0Y9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1h3Q9Z0Y9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1h3Q9Z0Y9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1h3Q9Z0Y9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1h3Q9Z0Y9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1h3Q9Z0Y9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.86■□□□□ 0.45
Nr1h3Q9Z0Y9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.86■□□□□ 0.45
Nr1h3Q9Z0Y9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.86■□□□□ 0.45
Nr1h3Q9Z0Y9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1h3Q9Z0Y9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Nr1h3Q9Z0Y9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1h3Q9Z0Y9 Gm18195-201ENSMUST00000207604 706 ntBASIC17.86■□□□□ 0.45
Nr1h3Q9Z0Y9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1h3Q9Z0Y9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.86■□□□□ 0.45
Nr1h3Q9Z0Y9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1h3Q9Z0Y9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1h3Q9Z0Y9 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.86■□□□□ 0.45
Nr1h3Q9Z0Y9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.86■□□□□ 0.45
Nr1h3Q9Z0Y9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1h3Q9Z0Y9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1h3Q9Z0Y9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nr1h3Q9Z0Y9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Gm11452-201ENSMUST00000122376 690 ntBASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nr1h3Q9Z0Y9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1h3Q9Z0Y9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Nr1h3Q9Z0Y9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.84■□□□□ 0.45
Nr1h3Q9Z0Y9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1h3Q9Z0Y9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1h3Q9Z0Y9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Nr1h3Q9Z0Y9 Gm13312-201ENSMUST00000119631 718 ntBASIC17.84■□□□□ 0.45
Nr1h3Q9Z0Y9 Gm12644-201ENSMUST00000119935 606 ntBASIC17.84■□□□□ 0.45
Nr1h3Q9Z0Y9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.84■□□□□ 0.45
Nr1h3Q9Z0Y9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.84■□□□□ 0.45
Nr1h3Q9Z0Y9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms