Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cx3cr1Q9Z0D9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cx3cr1Q9Z0D9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Cx3cr1Q9Z0D9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cx3cr1Q9Z0D9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cx3cr1Q9Z0D9 Gm13158-201ENSMUST00000122007 736 ntBASIC14.02□□□□□ -0.17
Cx3cr1Q9Z0D9 Gm10517-202ENSMUST00000192970 758 ntBASIC14.02□□□□□ -0.17
Cx3cr1Q9Z0D9 Gm37025-201ENSMUST00000195159 829 ntBASIC14.02□□□□□ -0.17
Cx3cr1Q9Z0D9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cx3cr1Q9Z0D9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cx3cr1Q9Z0D9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cx3cr1Q9Z0D9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cx3cr1Q9Z0D9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cx3cr1Q9Z0D9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cx3cr1Q9Z0D9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cx3cr1Q9Z0D9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Gm12382-201ENSMUST00000122005 922 ntBASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Gm42545-201ENSMUST00000202755 922 ntBASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cx3cr1Q9Z0D9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Gm11249-201ENSMUST00000117071 859 ntBASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Cx3cr1Q9Z0D9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cx3cr1Q9Z0D9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms