Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp1Q9R060 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Gm11594-201ENSMUST00000122313 162 ntBASIC14.41□□□□□ -0.1
Nubp1Q9R060 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Gm6546-201ENSMUST00000192096 766 ntBASIC14.41□□□□□ -0.1
Nubp1Q9R060 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Gm10060-201ENSMUST00000212002 111 ntBASIC14.41□□□□□ -0.1
Nubp1Q9R060 AC102523.2-201ENSMUST00000227813 983 ntBASIC14.41□□□□□ -0.1
Nubp1Q9R060 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.41□□□□□ -0.1
Nubp1Q9R060 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nubp1Q9R060 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp1Q9R060 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Nubp1Q9R060 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp1Q9R060 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp1Q9R060 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nubp1Q9R060 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Nubp1Q9R060 Gm12350-201ENSMUST00000121208 462 ntBASIC14.4□□□□□ -0.1
Nubp1Q9R060 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp1Q9R060 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.4□□□□□ -0.1
Nubp1Q9R060 Mir5131-201ENSMUST00000175426 93 ntBASIC14.4□□□□□ -0.1
Nubp1Q9R060 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp1Q9R060 Gm27702-201ENSMUST00000184512 56 ntBASIC14.4□□□□□ -0.1
Nubp1Q9R060 Gm5264-201ENSMUST00000190584 848 ntBASIC14.4□□□□□ -0.1
Nubp1Q9R060 AC154634.3-201ENSMUST00000224589 736 ntBASIC14.4□□□□□ -0.1
Nubp1Q9R060 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.4□□□□□ -0.1
Nubp1Q9R060 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp1Q9R060 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp1Q9R060 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Nubp1Q9R060 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Nubp1Q9R060 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.4□□□□□ -0.1
Nubp1Q9R060 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp1Q9R060 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp1Q9R060 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nubp1Q9R060 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp1Q9R060 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp1Q9R060 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp1Q9R060 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.4□□□□□ -0.1
Nubp1Q9R060 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp1Q9R060 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nubp1Q9R060 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.4□□□□□ -0.1
Nubp1Q9R060 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp1Q9R060 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nubp1Q9R060 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp1Q9R060 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp1Q9R060 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp1Q9R060 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp1Q9R060 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp1Q9R060 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp1Q9R060 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp1Q9R060 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp1Q9R060 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp1Q9R060 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Nubp1Q9R060 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.39□□□□□ -0.11
Nubp1Q9R060 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp1Q9R060 Gm6296-201ENSMUST00000222599 943 ntBASIC14.39□□□□□ -0.11
Nubp1Q9R060 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp1Q9R060 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp1Q9R060 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp1Q9R060 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nubp1Q9R060 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp1Q9R060 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp1Q9R060 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp1Q9R060 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Nubp1Q9R060 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nubp1Q9R060 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
Nubp1Q9R060 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.38□□□□□ -0.11
Nubp1Q9R060 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nubp1Q9R060 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nubp1Q9R060 Gm15467-201ENSMUST00000120582 445 ntBASIC14.38□□□□□ -0.11
Nubp1Q9R060 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nubp1Q9R060 Gm45574-201ENSMUST00000210921 331 ntBASIC14.38□□□□□ -0.11
Nubp1Q9R060 Gm5364-201ENSMUST00000216789 889 ntBASIC14.38□□□□□ -0.11
Nubp1Q9R060 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nubp1Q9R060 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nubp1Q9R060 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
Nubp1Q9R060 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms