Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Shroom3Q9QXN0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom3Q9QXN0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom3Q9QXN0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.51■□□□□ 0.23
Shroom3Q9QXN0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Shroom3Q9QXN0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom3Q9QXN0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom3Q9QXN0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom3Q9QXN0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom3Q9QXN0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom3Q9QXN0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom3Q9QXN0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.51■□□□□ 0.23
Shroom3Q9QXN0 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.51■□□□□ 0.23
Shroom3Q9QXN0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.51■□□□□ 0.23
Shroom3Q9QXN0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.51■□□□□ 0.23
Shroom3Q9QXN0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom3Q9QXN0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom3Q9QXN0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom3Q9QXN0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Shroom3Q9QXN0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom3Q9QXN0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Shroom3Q9QXN0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shroom3Q9QXN0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shroom3Q9QXN0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shroom3Q9QXN0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.5■□□□□ 0.23
Shroom3Q9QXN0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shroom3Q9QXN0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.5■□□□□ 0.23
Shroom3Q9QXN0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shroom3Q9QXN0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Shroom3Q9QXN0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shroom3Q9QXN0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.5■□□□□ 0.23
Shroom3Q9QXN0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.5■□□□□ 0.23
Shroom3Q9QXN0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom3Q9QXN0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom3Q9QXN0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom3Q9QXN0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.49■□□□□ 0.23
Shroom3Q9QXN0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom3Q9QXN0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom3Q9QXN0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom3Q9QXN0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom3Q9QXN0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom3Q9QXN0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Shroom3Q9QXN0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom3Q9QXN0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom3Q9QXN0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom3Q9QXN0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Shroom3Q9QXN0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom3Q9QXN0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom3Q9QXN0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom3Q9QXN0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom3Q9QXN0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom3Q9QXN0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Shroom3Q9QXN0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom3Q9QXN0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom3Q9QXN0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Shroom3Q9QXN0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Shroom3Q9QXN0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom3Q9QXN0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom3Q9QXN0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom3Q9QXN0 Olfr129-201ENSMUST00000122318 993 ntBASIC16.48■□□□□ 0.23
Shroom3Q9QXN0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom3Q9QXN0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.48■□□□□ 0.23
Shroom3Q9QXN0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.48■□□□□ 0.23
Shroom3Q9QXN0 Mzt1-203ENSMUST00000227948 952 ntBASIC16.48■□□□□ 0.23
Shroom3Q9QXN0 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.48■□□□□ 0.23
Shroom3Q9QXN0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom3Q9QXN0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Shroom3Q9QXN0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom3Q9QXN0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom3Q9QXN0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom3Q9QXN0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Shroom3Q9QXN0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Gm26039-201ENSMUST00000158152 144 ntBASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Gm10052-201ENSMUST00000168019 960 ntBASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Gm7729-201ENSMUST00000050143 801 ntBASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Shroom3Q9QXN0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms