Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Zc3h8Q9JJ48 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.31■□□□□ 0.04
Zc3h8Q9JJ48 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Zc3h8Q9JJ48 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zc3h8Q9JJ48 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zc3h8Q9JJ48 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zc3h8Q9JJ48 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Zc3h8Q9JJ48 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zc3h8Q9JJ48 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.31■□□□□ 0.04
Zc3h8Q9JJ48 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zc3h8Q9JJ48 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Zc3h8Q9JJ48 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Zc3h8Q9JJ48 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Zc3h8Q9JJ48 Gm15794-201ENSMUST00000120182 631 ntBASIC15.3■□□□□ 0.04
Zc3h8Q9JJ48 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Zc3h8Q9JJ48 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Zc3h8Q9JJ48 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.3■□□□□ 0.04
Zc3h8Q9JJ48 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.3■□□□□ 0.04
Zc3h8Q9JJ48 Gm27357-201ENSMUST00000183754 135 ntBASIC15.3■□□□□ 0.04
Zc3h8Q9JJ48 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.3■□□□□ 0.04
Zc3h8Q9JJ48 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Zc3h8Q9JJ48 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Zc3h8Q9JJ48 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Zc3h8Q9JJ48 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Zc3h8Q9JJ48 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Zc3h8Q9JJ48 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Zc3h8Q9JJ48 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Zc3h8Q9JJ48 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.3■□□□□ 0.04
Zc3h8Q9JJ48 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Zc3h8Q9JJ48 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Zc3h8Q9JJ48 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Zc3h8Q9JJ48 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zc3h8Q9JJ48 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.29■□□□□ 0.04
Zc3h8Q9JJ48 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Zc3h8Q9JJ48 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.29■□□□□ 0.04
Zc3h8Q9JJ48 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Zc3h8Q9JJ48 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zc3h8Q9JJ48 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zc3h8Q9JJ48 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zc3h8Q9JJ48 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zc3h8Q9JJ48 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.29■□□□□ 0.04
Zc3h8Q9JJ48 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.29■□□□□ 0.04
Zc3h8Q9JJ48 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zc3h8Q9JJ48 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Zc3h8Q9JJ48 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zc3h8Q9JJ48 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zc3h8Q9JJ48 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zc3h8Q9JJ48 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zc3h8Q9JJ48 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Zc3h8Q9JJ48 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zc3h8Q9JJ48 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zc3h8Q9JJ48 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Zc3h8Q9JJ48 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zc3h8Q9JJ48 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zc3h8Q9JJ48 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zc3h8Q9JJ48 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Zc3h8Q9JJ48 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zc3h8Q9JJ48 Gm17807-201ENSMUST00000186869 298 ntBASIC15.28■□□□□ 0.04
Zc3h8Q9JJ48 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.28■□□□□ 0.04
Zc3h8Q9JJ48 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.28■□□□□ 0.04
Zc3h8Q9JJ48 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zc3h8Q9JJ48 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zc3h8Q9JJ48 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Zc3h8Q9JJ48 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Zc3h8Q9JJ48 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zc3h8Q9JJ48 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Zc3h8Q9JJ48 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zc3h8Q9JJ48 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zc3h8Q9JJ48 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zc3h8Q9JJ48 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zc3h8Q9JJ48 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Zc3h8Q9JJ48 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Zc3h8Q9JJ48 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Zc3h8Q9JJ48 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Zc3h8Q9JJ48 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Zc3h8Q9JJ48 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Zc3h8Q9JJ48 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Zc3h8Q9JJ48 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.27■□□□□ 0.04
Zc3h8Q9JJ48 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Zc3h8Q9JJ48 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Zc3h8Q9JJ48 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Zc3h8Q9JJ48 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Zc3h8Q9JJ48 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Zc3h8Q9JJ48 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Zc3h8Q9JJ48 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Zc3h8Q9JJ48 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Zc3h8Q9JJ48 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.27■□□□□ 0.04
Zc3h8Q9JJ48 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.27■□□□□ 0.04
Zc3h8Q9JJ48 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.27■□□□□ 0.04
Zc3h8Q9JJ48 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Zc3h8Q9JJ48 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Zc3h8Q9JJ48 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.27■□□□□ 0.03
Zc3h8Q9JJ48 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Zc3h8Q9JJ48 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Zc3h8Q9JJ48 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Zc3h8Q9JJ48 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.27■□□□□ 0.03
Zc3h8Q9JJ48 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Zc3h8Q9JJ48 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Zc3h8Q9JJ48 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Zc3h8Q9JJ48 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms