Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1fQ9JIS7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1fQ9JIS7 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cacna1fQ9JIS7 Gm43575-201ENSMUST00000196420 516 ntBASIC18.68■□□□□ 0.58
Cacna1fQ9JIS7 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1fQ9JIS7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cacna1fQ9JIS7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cacna1fQ9JIS7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Cacna1fQ9JIS7 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1fQ9JIS7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1fQ9JIS7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1fQ9JIS7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1fQ9JIS7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1fQ9JIS7 Gm2756-201ENSMUST00000195851 400 ntBASIC18.68■□□□□ 0.58
Cacna1fQ9JIS7 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Cacna1fQ9JIS7 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1fQ9JIS7 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cacna1fQ9JIS7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
Cacna1fQ9JIS7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1fQ9JIS7 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.68■□□□□ 0.58
Cacna1fQ9JIS7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cacna1fQ9JIS7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1fQ9JIS7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cacna1fQ9JIS7 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1fQ9JIS7 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1fQ9JIS7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1fQ9JIS7 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1fQ9JIS7 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.67■□□□□ 0.58
Cacna1fQ9JIS7 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.67■□□□□ 0.58
Cacna1fQ9JIS7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1fQ9JIS7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.67■□□□□ 0.58
Cacna1fQ9JIS7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1fQ9JIS7 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.67■□□□□ 0.58
Cacna1fQ9JIS7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1fQ9JIS7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cacna1fQ9JIS7 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1fQ9JIS7 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.66■□□□□ 0.58
Cacna1fQ9JIS7 Gm8655-201ENSMUST00000221159 852 ntBASIC18.66■□□□□ 0.58
Cacna1fQ9JIS7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1fQ9JIS7 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1fQ9JIS7 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1fQ9JIS7 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.66■□□□□ 0.58
Cacna1fQ9JIS7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.66■□□□□ 0.58
Cacna1fQ9JIS7 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1fQ9JIS7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1fQ9JIS7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.66■□□□□ 0.58
Cacna1fQ9JIS7 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1fQ9JIS7 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cacna1fQ9JIS7 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.66■□□□□ 0.58
Cacna1fQ9JIS7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1fQ9JIS7 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1fQ9JIS7 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1fQ9JIS7 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.65■□□□□ 0.58
Cacna1fQ9JIS7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1fQ9JIS7 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1fQ9JIS7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cacna1fQ9JIS7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1fQ9JIS7 Gm8344-201ENSMUST00000119813 856 ntBASIC18.65■□□□□ 0.58
Cacna1fQ9JIS7 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.65■□□□□ 0.58
Cacna1fQ9JIS7 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1fQ9JIS7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1fQ9JIS7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1fQ9JIS7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1fQ9JIS7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1fQ9JIS7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1fQ9JIS7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1fQ9JIS7 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.64■□□□□ 0.58
Cacna1fQ9JIS7 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.64■□□□□ 0.58
Cacna1fQ9JIS7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.64■□□□□ 0.58
Cacna1fQ9JIS7 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1fQ9JIS7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1fQ9JIS7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Cacna1fQ9JIS7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1fQ9JIS7 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.64■□□□□ 0.57
Cacna1fQ9JIS7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.64■□□□□ 0.57
Cacna1fQ9JIS7 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1fQ9JIS7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Cacna1fQ9JIS7 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1fQ9JIS7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1fQ9JIS7 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.63■□□□□ 0.57
Cacna1fQ9JIS7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1fQ9JIS7 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1fQ9JIS7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cacna1fQ9JIS7 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1fQ9JIS7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1fQ9JIS7 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1fQ9JIS7 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.62■□□□□ 0.57
Cacna1fQ9JIS7 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.62■□□□□ 0.57
Cacna1fQ9JIS7 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.62■□□□□ 0.57
Cacna1fQ9JIS7 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1fQ9JIS7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cacna1fQ9JIS7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1fQ9JIS7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1fQ9JIS7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1fQ9JIS7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1fQ9JIS7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.62■□□□□ 0.57
Cacna1fQ9JIS7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1fQ9JIS7 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1fQ9JIS7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1fQ9JIS7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms