Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tube1Q9D6T1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Tube1Q9D6T1 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.34■□□□□ 0.53
Tube1Q9D6T1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.34■□□□□ 0.53
Tube1Q9D6T1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Tube1Q9D6T1 Gm17807-201ENSMUST00000186869 298 ntBASIC18.34■□□□□ 0.53
Tube1Q9D6T1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tube1Q9D6T1 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.34■□□□□ 0.53
Tube1Q9D6T1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tube1Q9D6T1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Tube1Q9D6T1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tube1Q9D6T1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Tube1Q9D6T1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tube1Q9D6T1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tube1Q9D6T1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tube1Q9D6T1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tube1Q9D6T1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tube1Q9D6T1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tube1Q9D6T1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tube1Q9D6T1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tube1Q9D6T1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tube1Q9D6T1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Tube1Q9D6T1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tube1Q9D6T1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tube1Q9D6T1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tube1Q9D6T1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Tube1Q9D6T1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.33■□□□□ 0.52
Tube1Q9D6T1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.33■□□□□ 0.52
Tube1Q9D6T1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tube1Q9D6T1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tube1Q9D6T1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tube1Q9D6T1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tube1Q9D6T1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tube1Q9D6T1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
Tube1Q9D6T1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tube1Q9D6T1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tube1Q9D6T1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tube1Q9D6T1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Tube1Q9D6T1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Tube1Q9D6T1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Tube1Q9D6T1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.32■□□□□ 0.52
Tube1Q9D6T1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tube1Q9D6T1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Tube1Q9D6T1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tube1Q9D6T1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tube1Q9D6T1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tube1Q9D6T1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Tube1Q9D6T1 Gm27000-201ENSMUST00000182943 842 ntBASIC18.32■□□□□ 0.52
Tube1Q9D6T1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Tube1Q9D6T1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tube1Q9D6T1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tube1Q9D6T1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tube1Q9D6T1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tube1Q9D6T1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tube1Q9D6T1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tube1Q9D6T1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tube1Q9D6T1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tube1Q9D6T1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tube1Q9D6T1 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tube1Q9D6T1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tube1Q9D6T1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tube1Q9D6T1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.31■□□□□ 0.52
Tube1Q9D6T1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tube1Q9D6T1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.31■□□□□ 0.52
Tube1Q9D6T1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.31■□□□□ 0.52
Tube1Q9D6T1 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.31■□□□□ 0.52
Tube1Q9D6T1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tube1Q9D6T1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.31■□□□□ 0.52
Tube1Q9D6T1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tube1Q9D6T1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tube1Q9D6T1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.31■□□□□ 0.52
Tube1Q9D6T1 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tube1Q9D6T1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.31■□□□□ 0.52
Tube1Q9D6T1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tube1Q9D6T1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tube1Q9D6T1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tube1Q9D6T1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tube1Q9D6T1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tube1Q9D6T1 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tube1Q9D6T1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tube1Q9D6T1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Tube1Q9D6T1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tube1Q9D6T1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tube1Q9D6T1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tube1Q9D6T1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.3■□□□□ 0.52
Tube1Q9D6T1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.3■□□□□ 0.52
Tube1Q9D6T1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.3■□□□□ 0.52
Tube1Q9D6T1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tube1Q9D6T1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Tube1Q9D6T1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tube1Q9D6T1 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tube1Q9D6T1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tube1Q9D6T1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tube1Q9D6T1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.3■□□□□ 0.52
Tube1Q9D6T1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tube1Q9D6T1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tube1Q9D6T1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Tube1Q9D6T1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tube1Q9D6T1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tube1Q9D6T1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms