Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.58■□□□□ 0.08
Chaf1bQ9D0N7 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chaf1bQ9D0N7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Chaf1bQ9D0N7 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chaf1bQ9D0N7 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chaf1bQ9D0N7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.57■□□□□ 0.08
Chaf1bQ9D0N7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chaf1bQ9D0N7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.57■□□□□ 0.08
Chaf1bQ9D0N7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Chaf1bQ9D0N7 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chaf1bQ9D0N7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.57■□□□□ 0.08
Chaf1bQ9D0N7 Gm4974-201ENSMUST00000209974 875 ntBASIC15.57■□□□□ 0.08
Chaf1bQ9D0N7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chaf1bQ9D0N7 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chaf1bQ9D0N7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chaf1bQ9D0N7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.57■□□□□ 0.08
Chaf1bQ9D0N7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chaf1bQ9D0N7 Dio3-201ENSMUST00000097228 1449 ntBASIC15.57■□□□□ 0.08
Chaf1bQ9D0N7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chaf1bQ9D0N7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chaf1bQ9D0N7 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chaf1bQ9D0N7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chaf1bQ9D0N7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chaf1bQ9D0N7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chaf1bQ9D0N7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 Gm11249-201ENSMUST00000117071 859 ntBASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Chaf1bQ9D0N7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chaf1bQ9D0N7 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 Gm18025-201ENSMUST00000221733 862 ntBASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chaf1bQ9D0N7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms