Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Mrpl55Q9CZ83 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Mrpl55Q9CZ83 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Mrpl55Q9CZ83 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Mrpl55Q9CZ83 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Mrpl55Q9CZ83 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC10.91□□□□□ -0.66
Mrpl55Q9CZ83 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Mrpl55Q9CZ83 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Mrpl55Q9CZ83 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Mrpl55Q9CZ83 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Mrpl55Q9CZ83 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Mrpl55Q9CZ83 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl55Q9CZ83 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC10.9□□□□□ -0.66
Mrpl55Q9CZ83 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl55Q9CZ83 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl55Q9CZ83 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl55Q9CZ83 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl55Q9CZ83 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl55Q9CZ83 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Mrpl55Q9CZ83 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl55Q9CZ83 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC10.9□□□□□ -0.66
Mrpl55Q9CZ83 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Mrpl55Q9CZ83 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC10.9□□□□□ -0.66
Mrpl55Q9CZ83 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl55Q9CZ83 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl55Q9CZ83 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl55Q9CZ83 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl55Q9CZ83 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl55Q9CZ83 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Mrpl55Q9CZ83 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Mrpl55Q9CZ83 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Mrpl55Q9CZ83 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Mrpl55Q9CZ83 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Mrpl55Q9CZ83 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Rubie-203ENSMUST00000227803 2430 ntBASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 AC124581.1-201ENSMUST00000225416 1399 ntBASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Mrpl55Q9CZ83 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 CT025610.1-201ENSMUST00000224552 1786 ntBASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Mrpl55Q9CZ83 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms