Protein–RNA interactions for Protein: Q9CYC3

Tmem39a, Transmembrane protein 39A, mousemouse

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem39aQ9CYC3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tmem39aQ9CYC3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.47■□□□□ 0.55
Tmem39aQ9CYC3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.47■□□□□ 0.55
Tmem39aQ9CYC3 Gm27525-201ENSMUST00000184465 107 ntBASIC18.47■□□□□ 0.55
Tmem39aQ9CYC3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.47■□□□□ 0.55
Tmem39aQ9CYC3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.47■□□□□ 0.55
Tmem39aQ9CYC3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tmem39aQ9CYC3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tmem39aQ9CYC3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tmem39aQ9CYC3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Tmem39aQ9CYC3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tmem39aQ9CYC3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tmem39aQ9CYC3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.47■□□□□ 0.55
Tmem39aQ9CYC3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmem39aQ9CYC3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmem39aQ9CYC3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmem39aQ9CYC3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmem39aQ9CYC3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmem39aQ9CYC3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmem39aQ9CYC3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmem39aQ9CYC3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmem39aQ9CYC3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Tmem39aQ9CYC3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmem39aQ9CYC3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmem39aQ9CYC3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmem39aQ9CYC3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tmem39aQ9CYC3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Tmem39aQ9CYC3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tmem39aQ9CYC3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Tmem39aQ9CYC3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmem39aQ9CYC3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tmem39aQ9CYC3 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.46■□□□□ 0.55
Tmem39aQ9CYC3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Tmem39aQ9CYC3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tmem39aQ9CYC3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Tmem39aQ9CYC3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Tmem39aQ9CYC3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tmem39aQ9CYC3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Tmem39aQ9CYC3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tmem39aQ9CYC3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tmem39aQ9CYC3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tmem39aQ9CYC3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.44■□□□□ 0.54
Tmem39aQ9CYC3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tmem39aQ9CYC3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Tmem39aQ9CYC3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tmem39aQ9CYC3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tmem39aQ9CYC3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tmem39aQ9CYC3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tmem39aQ9CYC3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tmem39aQ9CYC3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tmem39aQ9CYC3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.44■□□□□ 0.54
Tmem39aQ9CYC3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.44■□□□□ 0.54
Tmem39aQ9CYC3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Tmem39aQ9CYC3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Tmem39aQ9CYC3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tmem39aQ9CYC3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tmem39aQ9CYC3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tmem39aQ9CYC3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Tmem39aQ9CYC3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tmem39aQ9CYC3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.43■□□□□ 0.54
Tmem39aQ9CYC3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tmem39aQ9CYC3 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.43■□□□□ 0.54
Tmem39aQ9CYC3 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.43■□□□□ 0.54
Tmem39aQ9CYC3 Gm11336-201ENSMUST00000118168 334 ntBASIC18.43■□□□□ 0.54
Tmem39aQ9CYC3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.43■□□□□ 0.54
Tmem39aQ9CYC3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.43■□□□□ 0.54
Tmem39aQ9CYC3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tmem39aQ9CYC3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tmem39aQ9CYC3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tmem39aQ9CYC3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tmem39aQ9CYC3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.43■□□□□ 0.54
Tmem39aQ9CYC3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tmem39aQ9CYC3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Tmem39aQ9CYC3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tmem39aQ9CYC3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tmem39aQ9CYC3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms