Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nip7Q9CXK8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nip7Q9CXK8 Gm11779-201ENSMUST00000118541 368 ntBASIC20.5■□□□□ 0.87
Nip7Q9CXK8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC20.5■□□□□ 0.87
Nip7Q9CXK8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC20.5■□□□□ 0.87
Nip7Q9CXK8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nip7Q9CXK8 Gm37584-201ENSMUST00000193595 1290 ntBASIC20.5■□□□□ 0.87
Nip7Q9CXK8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC20.5■□□□□ 0.87
Nip7Q9CXK8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC20.5■□□□□ 0.87
Nip7Q9CXK8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nip7Q9CXK8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nip7Q9CXK8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nip7Q9CXK8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nip7Q9CXK8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nip7Q9CXK8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Nip7Q9CXK8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.49■□□□□ 0.87
Nip7Q9CXK8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC20.49■□□□□ 0.87
Nip7Q9CXK8 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nip7Q9CXK8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Nip7Q9CXK8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nip7Q9CXK8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nip7Q9CXK8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nip7Q9CXK8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nip7Q9CXK8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Nip7Q9CXK8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nip7Q9CXK8 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nip7Q9CXK8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nip7Q9CXK8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Nip7Q9CXK8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nip7Q9CXK8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nip7Q9CXK8 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nip7Q9CXK8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.48■□□□□ 0.87
Nip7Q9CXK8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20.48■□□□□ 0.87
Nip7Q9CXK8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Nip7Q9CXK8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nip7Q9CXK8 Psmb5-202ENSMUST00000227257 622 ntBASIC20.48■□□□□ 0.87
Nip7Q9CXK8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Nip7Q9CXK8 Gm15590-201ENSMUST00000078419 552 ntBASIC20.48■□□□□ 0.87
Nip7Q9CXK8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nip7Q9CXK8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nip7Q9CXK8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nip7Q9CXK8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Nip7Q9CXK8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nip7Q9CXK8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Nip7Q9CXK8 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.48■□□□□ 0.87
Nip7Q9CXK8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nip7Q9CXK8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nip7Q9CXK8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nip7Q9CXK8 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nip7Q9CXK8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Nip7Q9CXK8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nip7Q9CXK8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nip7Q9CXK8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Nip7Q9CXK8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.47■□□□□ 0.87
Nip7Q9CXK8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.47■□□□□ 0.87
Nip7Q9CXK8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nip7Q9CXK8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nip7Q9CXK8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nip7Q9CXK8 Gm4459-201ENSMUST00000118750 468 ntBASIC20.47■□□□□ 0.87
Nip7Q9CXK8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
Nip7Q9CXK8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC20.47■□□□□ 0.87
Nip7Q9CXK8 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC20.47■□□□□ 0.87
Nip7Q9CXK8 Gm5264-201ENSMUST00000190584 848 ntBASIC20.47■□□□□ 0.87
Nip7Q9CXK8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nip7Q9CXK8 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.47■□□□□ 0.87
Nip7Q9CXK8 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nip7Q9CXK8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Nip7Q9CXK8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.47■□□□□ 0.87
Nip7Q9CXK8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nip7Q9CXK8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nip7Q9CXK8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nip7Q9CXK8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nip7Q9CXK8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nip7Q9CXK8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Nip7Q9CXK8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nip7Q9CXK8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nip7Q9CXK8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nip7Q9CXK8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nip7Q9CXK8 Gm8097-201ENSMUST00000117903 829 ntBASIC20.46■□□□□ 0.87
Nip7Q9CXK8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.46■□□□□ 0.87
Nip7Q9CXK8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
Nip7Q9CXK8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC20.46■□□□□ 0.87
Nip7Q9CXK8 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nip7Q9CXK8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nip7Q9CXK8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nip7Q9CXK8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nip7Q9CXK8 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.45■□□□□ 0.86
Nip7Q9CXK8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nip7Q9CXK8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nip7Q9CXK8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Nip7Q9CXK8 Gm12497-201ENSMUST00000138778 237 ntBASIC20.45■□□□□ 0.86
Nip7Q9CXK8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nip7Q9CXK8 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.45■□□□□ 0.86
Nip7Q9CXK8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC20.45■□□□□ 0.86
Nip7Q9CXK8 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC20.45■□□□□ 0.86
Nip7Q9CXK8 Gm8349-201ENSMUST00000182720 1003 ntBASIC20.45■□□□□ 0.86
Nip7Q9CXK8 Gm2213-201ENSMUST00000197485 688 ntBASIC20.45■□□□□ 0.86
Nip7Q9CXK8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nip7Q9CXK8 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nip7Q9CXK8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms