Protein–RNA interactions for Protein: Q9CPR4

Rpl17, 60S ribosomal protein L17, mousemouse

Known RBP Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl17Q9CPR4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Gm25745-201ENSMUST00000174945 133 ntBASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Mir5131-201ENSMUST00000175426 93 ntBASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Gm27525-201ENSMUST00000184465 107 ntBASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Gm18206-201ENSMUST00000207027 926 ntBASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rpl17Q9CPR4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl17Q9CPR4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl17Q9CPR4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl17Q9CPR4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl17Q9CPR4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl17Q9CPR4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl17Q9CPR4 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl17Q9CPR4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl17Q9CPR4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl17Q9CPR4 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.13■□□□□ 0.33
Rpl17Q9CPR4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl17Q9CPR4 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rpl17Q9CPR4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl17Q9CPR4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl17Q9CPR4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rpl17Q9CPR4 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rpl17Q9CPR4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.12■□□□□ 0.33
Rpl17Q9CPR4 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.12■□□□□ 0.33
Rpl17Q9CPR4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl17Q9CPR4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl17Q9CPR4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl17Q9CPR4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl17Q9CPR4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl17Q9CPR4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl17Q9CPR4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rpl17Q9CPR4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Rpl17Q9CPR4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl17Q9CPR4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl17Q9CPR4 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.12■□□□□ 0.33
Rpl17Q9CPR4 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.12■□□□□ 0.33
Rpl17Q9CPR4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl17Q9CPR4 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.12■□□□□ 0.33
Rpl17Q9CPR4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rpl17Q9CPR4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Rpl17Q9CPR4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl17Q9CPR4 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.12■□□□□ 0.33
Rpl17Q9CPR4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl17Q9CPR4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl17Q9CPR4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.12■□□□□ 0.33
Rpl17Q9CPR4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rpl17Q9CPR4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rpl17Q9CPR4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl17Q9CPR4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rpl17Q9CPR4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.11■□□□□ 0.33
Rpl17Q9CPR4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.11■□□□□ 0.33
Rpl17Q9CPR4 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl17Q9CPR4 Gm7506-201ENSMUST00000207758 815 ntBASIC17.11■□□□□ 0.33
Rpl17Q9CPR4 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl17Q9CPR4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl17Q9CPR4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rpl17Q9CPR4 Gm5867-201ENSMUST00000063197 592 ntBASIC17.11■□□□□ 0.33
Rpl17Q9CPR4 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rpl17Q9CPR4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl17Q9CPR4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl17Q9CPR4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rpl17Q9CPR4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl17Q9CPR4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl17Q9CPR4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl17Q9CPR4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl17Q9CPR4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rpl17Q9CPR4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl17Q9CPR4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl17Q9CPR4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl17Q9CPR4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.1■□□□□ 0.33
Rpl17Q9CPR4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rpl17Q9CPR4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms