Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.37■□□□□ 0.21
Trim33Q99PP7 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Actl10-202ENSMUST00000226583 1501 ntBASIC16.36■□□□□ 0.21
Trim33Q99PP7 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.36■□□□□ 0.21
Trim33Q99PP7 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim33Q99PP7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Gm10566-201ENSMUST00000086739 996 ntBASIC16.36■□□□□ 0.21
Trim33Q99PP7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.36■□□□□ 0.21
Trim33Q99PP7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Dancr-204ENSMUST00000132389 2347 ntBASIC16.35■□□□□ 0.21
Trim33Q99PP7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim33Q99PP7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Gm18101-201ENSMUST00000215769 548 ntBASIC16.35■□□□□ 0.21
Trim33Q99PP7 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.35■□□□□ 0.21
Trim33Q99PP7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim33Q99PP7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim33Q99PP7 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim33Q99PP7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Trim33Q99PP7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim33Q99PP7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim33Q99PP7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim33Q99PP7 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.34■□□□□ 0.21
Trim33Q99PP7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim33Q99PP7 Gm22697-201ENSMUST00000175194 63 ntBASIC16.34■□□□□ 0.21
Trim33Q99PP7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trim33Q99PP7 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.34■□□□□ 0.21
Trim33Q99PP7 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim33Q99PP7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim33Q99PP7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim33Q99PP7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim33Q99PP7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim33Q99PP7 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trim33Q99PP7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim33Q99PP7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim33Q99PP7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim33Q99PP7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim33Q99PP7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim33Q99PP7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim33Q99PP7 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim33Q99PP7 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim33Q99PP7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim33Q99PP7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim33Q99PP7 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
Trim33Q99PP7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim33Q99PP7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms