Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim34aQ99PP6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim34aQ99PP6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Trim34aQ99PP6 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim34aQ99PP6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim34aQ99PP6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim34aQ99PP6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim34aQ99PP6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim34aQ99PP6 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim34aQ99PP6 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Trim34aQ99PP6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Trim34aQ99PP6 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim34aQ99PP6 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim34aQ99PP6 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC20.32■□□□□ 0.84
Trim34aQ99PP6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim34aQ99PP6 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim34aQ99PP6 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim34aQ99PP6 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim34aQ99PP6 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim34aQ99PP6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.31■□□□□ 0.84
Trim34aQ99PP6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim34aQ99PP6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim34aQ99PP6 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim34aQ99PP6 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.31■□□□□ 0.84
Trim34aQ99PP6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim34aQ99PP6 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC20.31■□□□□ 0.84
Trim34aQ99PP6 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC20.31■□□□□ 0.84
Trim34aQ99PP6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
Trim34aQ99PP6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim34aQ99PP6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim34aQ99PP6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim34aQ99PP6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trim34aQ99PP6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim34aQ99PP6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim34aQ99PP6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC20.31■□□□□ 0.84
Trim34aQ99PP6 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim34aQ99PP6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim34aQ99PP6 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim34aQ99PP6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim34aQ99PP6 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC20.3■□□□□ 0.84
Trim34aQ99PP6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Trim34aQ99PP6 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC20.3■□□□□ 0.84
Trim34aQ99PP6 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.3■□□□□ 0.84
Trim34aQ99PP6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC20.3■□□□□ 0.84
Trim34aQ99PP6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.3■□□□□ 0.84
Trim34aQ99PP6 Gm7506-201ENSMUST00000207758 815 ntBASIC20.3■□□□□ 0.84
Trim34aQ99PP6 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim34aQ99PP6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim34aQ99PP6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim34aQ99PP6 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Trim34aQ99PP6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34aQ99PP6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34aQ99PP6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34aQ99PP6 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34aQ99PP6 Gm12350-201ENSMUST00000121208 462 ntBASIC20.29■□□□□ 0.84
Trim34aQ99PP6 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC20.29■□□□□ 0.84
Trim34aQ99PP6 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC20.29■□□□□ 0.84
Trim34aQ99PP6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34aQ99PP6 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34aQ99PP6 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC20.29■□□□□ 0.84
Trim34aQ99PP6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34aQ99PP6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.29■□□□□ 0.84
Trim34aQ99PP6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34aQ99PP6 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34aQ99PP6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34aQ99PP6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34aQ99PP6 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim34aQ99PP6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim34aQ99PP6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim34aQ99PP6 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.28■□□□□ 0.84
Trim34aQ99PP6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim34aQ99PP6 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.28■□□□□ 0.84
Trim34aQ99PP6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim34aQ99PP6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim34aQ99PP6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Trim34aQ99PP6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim34aQ99PP6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim34aQ99PP6 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC20.28■□□□□ 0.84
Trim34aQ99PP6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim34aQ99PP6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim34aQ99PP6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim34aQ99PP6 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Trim34aQ99PP6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC20.27■□□□□ 0.84
Trim34aQ99PP6 Gm4535-201ENSMUST00000182274 558 ntBASIC20.27■□□□□ 0.84
Trim34aQ99PP6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC20.27■□□□□ 0.84
Trim34aQ99PP6 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim34aQ99PP6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim34aQ99PP6 Gm10355-201ENSMUST00000097146 517 ntBASIC20.27■□□□□ 0.84
Trim34aQ99PP6 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim34aQ99PP6 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim34aQ99PP6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim34aQ99PP6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim34aQ99PP6 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim34aQ99PP6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Trim34aQ99PP6 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Trim34aQ99PP6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim34aQ99PP6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim34aQ99PP6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Trim34aQ99PP6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim34aQ99PP6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms