Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Rtn4Q99P72 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC21.02■□□□□ 0.96
Rtn4Q99P72 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Rtn4Q99P72 Actl10-202ENSMUST00000226583 1501 ntBASIC21.02■□□□□ 0.96
Rtn4Q99P72 Gm43598-201ENSMUST00000202482 2479 ntBASIC21.02■□□□□ 0.96
Rtn4Q99P72 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rtn4Q99P72 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Rtn4Q99P72 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rtn4Q99P72 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rtn4Q99P72 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC21.02■□□□□ 0.95
Rtn4Q99P72 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rtn4Q99P72 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rtn4Q99P72 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Rtn4Q99P72 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rtn4Q99P72 Mir770-201ENSMUST00000103252 94 ntBASIC21.01■□□□□ 0.95
Rtn4Q99P72 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Rtn4Q99P72 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC21.01■□□□□ 0.95
Rtn4Q99P72 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rtn4Q99P72 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC21.01■□□□□ 0.95
Rtn4Q99P72 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC21.01■□□□□ 0.95
Rtn4Q99P72 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rtn4Q99P72 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Rtn4Q99P72 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rtn4Q99P72 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rtn4Q99P72 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rtn4Q99P72 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rtn4Q99P72 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC21■□□□□ 0.95
Rtn4Q99P72 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC21■□□□□ 0.95
Rtn4Q99P72 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Rtn4Q99P72 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Rtn4Q99P72 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC21■□□□□ 0.95
Rtn4Q99P72 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rtn4Q99P72 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rtn4Q99P72 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rtn4Q99P72 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rtn4Q99P72 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rtn4Q99P72 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Rtn4Q99P72 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC21■□□□□ 0.95
Rtn4Q99P72 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rtn4Q99P72 Gm9519-201ENSMUST00000206108 1337 ntBASIC21■□□□□ 0.95
Rtn4Q99P72 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rtn4Q99P72 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Rtn4Q99P72 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Rtn4Q99P72 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rtn4Q99P72 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rtn4Q99P72 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rtn4Q99P72 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rtn4Q99P72 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.99■□□□□ 0.95
Rtn4Q99P72 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rtn4Q99P72 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rtn4Q99P72 Gm37722-201ENSMUST00000193757 208 ntBASIC20.99■□□□□ 0.95
Rtn4Q99P72 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC20.99■□□□□ 0.95
Rtn4Q99P72 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rtn4Q99P72 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Rtn4Q99P72 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rtn4Q99P72 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Rtn4Q99P72 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rtn4Q99P72 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rtn4Q99P72 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rtn4Q99P72 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rtn4Q99P72 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rtn4Q99P72 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Rtn4Q99P72 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC20.98■□□□□ 0.95
Rtn4Q99P72 Gm11950-201ENSMUST00000121615 838 ntBASIC20.98■□□□□ 0.95
Rtn4Q99P72 Gm17807-201ENSMUST00000186869 298 ntBASIC20.98■□□□□ 0.95
Rtn4Q99P72 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rtn4Q99P72 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rtn4Q99P72 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rtn4Q99P72 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Rtn4Q99P72 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rtn4Q99P72 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rtn4Q99P72 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rtn4Q99P72 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rtn4Q99P72 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rtn4Q99P72 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Rtn4Q99P72 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rtn4Q99P72 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rtn4Q99P72 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Rtn4Q99P72 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rtn4Q99P72 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rtn4Q99P72 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rtn4Q99P72 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rtn4Q99P72 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rtn4Q99P72 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rtn4Q99P72 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.97■□□□□ 0.95
Rtn4Q99P72 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.97■□□□□ 0.95
Rtn4Q99P72 Gm44136-201ENSMUST00000203819 1106 ntBASIC20.97■□□□□ 0.95
Rtn4Q99P72 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Rtn4Q99P72 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Rtn4Q99P72 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rtn4Q99P72 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rtn4Q99P72 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Rtn4Q99P72 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rtn4Q99P72 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rtn4Q99P72 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rtn4Q99P72 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.96■□□□□ 0.95
Rtn4Q99P72 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rtn4Q99P72 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rtn4Q99P72 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rtn4Q99P72 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms